RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 GNA15P30679 374 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 STT3AP46977 705 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 RPL10AP62906 217 aaKnown RBP17.68■□□□□ 0.42
PTPRA-205ENST00000399903 TBL3Q12788 808 aaKnown RBP17.68■□□□□ 0.42
PTPRA-205ENST00000399903 TMEM132BQ14DG7 1078 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 OASLQ15646 514 aaKnown RBP17.68■□□□□ 0.42
PTPRA-205ENST00000399903 SLC9A9Q8IVB4 645 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 GAB3Q8WWW8 586 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 COPS7BQ9H9Q2 264 aaPredicted RBP17.68■□□□□ 0.42
PTPRA-205ENST00000399903 PCDH9Q9HC56 1237 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 SYNPO2Q9UMS6 1093 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 POMPQ9Y244 141 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 SH3GLB1Q9Y371 365 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 AP4B1Q9Y6B7 739 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 STK24Q9Y6E0 443 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 NOP56O00567 594 aaKnown RBP17.68■□□□□ 0.42
PTPRA-205ENST00000399903 AIM2O14862 343 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 TRMUO75648 421 aaKnown RBP17.68■□□□□ 0.42
PTPRA-205ENST00000399903 TCN1P20061 433 aaPredicted RBP17.68■□□□□ 0.42
PTPRA-205ENST00000399903 KCNA4P22459 653 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 ZNF280AP59817 542 aaPredicted RBP17.68■□□□□ 0.42
PTPRA-205ENST00000399903 PLOD1Q02809 727 aaPredicted RBP17.68■□□□□ 0.42
PTPRA-205ENST00000399903 NFIL3Q16649 462 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 CYP4A22Q5TCH4 519 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 UNC45BQ8IWX7 931 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 FEZF2Q8TBJ5 459 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 MAN1C1Q9NR34 630 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 CDH22Q9UJ99 828 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 ARHGAP10A1A4S6 786 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 GTF2H1P32780 548 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 CNTN2Q02246 1040 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 WDR75Q8IWA0 830 aaKnown RBP17.67■□□□□ 0.42
PTPRA-205ENST00000399903 SLC16A10Q8TF71 515 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 BSNDQ8WZ55 320 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 CEP170P1Q96L14 293 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 CCDC106Q9BWC9 280 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 CALN1Q9BXU9 219 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 Q9H521 79 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 PCDHB2Q9Y5E7 798 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 ATP9BO43861 1147 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 NAA20P61599 178 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 GRAMD4Q6IC98 578 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 MZB1Q8WU39 189 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 TRIM11Q96F44 468 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 TMEM8AQ9HCN3 771 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 HBS1LQ9Y450 684 aaKnown RBP17.67■□□□□ 0.42
PTPRA-205ENST00000399903 GMEB1Q9Y692 573 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 SLC26A4O43511 780 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 ITGA9Q13797 1035 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 CHSY1Q86X52 802 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 RFX6Q8HWS3 928 aa17.67■□□□□ 0.42
PTPRA-205ENST00000399903 PIK3R2O00459 728 aa17.66■□□□□ 0.42
PTPRA-205ENST00000399903 DCXO43602 365 aa17.66■□□□□ 0.42
PTPRA-205ENST00000399903 STRNO43815 780 aa17.66■□□□□ 0.42
PTPRA-205ENST00000399903 PLA2G6O60733 806 aa17.66■□□□□ 0.42
PTPRA-205ENST00000399903 KRT37O76014 449 aa17.66■□□□□ 0.42
PTPRA-205ENST00000399903 SLC5A2P31639 672 aa17.66■□□□□ 0.42
PTPRA-205ENST00000399903 HNRNPDQ14103 355 aaKnown RBP17.66■□□□□ 0.42
PTPRA-205ENST00000399903 NRF1Q16656 503 aa17.66■□□□□ 0.42
PTPRA-205ENST00000399903 MOB2Q70IA6 237 aa17.66■□□□□ 0.42
PTPRA-205ENST00000399903 ZNF668Q96K58 619 aaPredicted RBP17.66■□□□□ 0.42
PTPRA-205ENST00000399903 XAB2Q9HCS7 855 aaKnown RBP17.66■□□□□ 0.42
PTPRA-205ENST00000399903 SSU72Q9NP77 194 aaKnown RBP17.66■□□□□ 0.42
PTPRA-205ENST00000399903 AVENQ9NQS1 362 aaPredicted RBP17.66■□□□□ 0.42
PTPRA-205ENST00000399903 CEP350Q5VT06 3117 aa17.66■□□□□ 0.42
PTPRA-205ENST00000399903 CXorf49A8MYA2 514 aaPredicted RBP17.66■□□□□ 0.42
PTPRA-205ENST00000399903 HNRNPDLO14979 420 aaKnown RBP17.66■□□□□ 0.42
PTPRA-205ENST00000399903 RGS20O76081 388 aa17.66■□□□□ 0.42
PTPRA-205ENST00000399903 HDAC4P56524 1084 aa17.66■□□□□ 0.42
PTPRA-205ENST00000399903 TFDP3Q5H9I0 405 aa17.66■□□□□ 0.42
PTPRA-205ENST00000399903 DNAJC24Q6P3W2 148 aa17.66■□□□□ 0.42
PTPRA-205ENST00000399903 AAGABQ6PD74 315 aa17.66■□□□□ 0.42
PTPRA-205ENST00000399903 ZBTB8BQ8NAP8 495 aaPredicted RBP17.66■□□□□ 0.42
PTPRA-205ENST00000399903 TTC13Q8NBP0 860 aa17.66■□□□□ 0.42
PTPRA-205ENST00000399903 SEPT9Q9UHD8 586 aaPredicted RBP17.66■□□□□ 0.42
PTPRA-205ENST00000399903 UBE4BO95155 1302 aa17.66■□□□□ 0.42
PTPRA-205ENST00000399903 ITM2AO43736 263 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 CRTAMO95727 393 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 LPIN1Q14693 890 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 HSPH1Q92598 858 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 TMIGD2Q96BF3 282 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 CCT7Q99832 543 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 CAAP1Q9H8G2 361 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 E9PBE3 544 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 KLHL41O60662 606 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 PSMD6Q15008 389 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 MTERF2Q49AM1 385 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 MON1BQ7L1V2 547 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 USP13Q92995 863 aaPredicted RBP17.65■□□□□ 0.42
PTPRA-205ENST00000399903 FAF2Q96CS3 445 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 PPCSQ9HAB8 311 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 IP6K2Q9UHH9 426 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 XPOTO43592 962 aaKnown RBP17.65■□□□□ 0.42
PTPRA-205ENST00000399903 SERPINA6P08185 405 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 ITPRIPL1Q6GPH6 555 aa17.65■□□□□ 0.42
PTPRA-205ENST00000399903 PTAR1Q7Z6K3 402 aaPredicted RBP17.65■□□□□ 0.42
PTPRA-205ENST00000399903 hCG_1818297A0A087WSY0 165 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 PDGFRBP09619 1106 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 EIF4BP23588 611 aaKnown RBP17.64■□□□□ 0.41
PTPRA-205ENST00000399903 CPOXP36551 454 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms