RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 BRSK2Q8IWQ3 736 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 CYP4X1Q8N118 509 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 ZNF579Q8NAF0 562 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 TOP1MTQ969P6 601 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 KLF6Q99612 283 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 CATSPERBQ9H7T0 1116 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 KANSL3Q9P2N6 904 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 PLXNC1O60486 1568 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 ECDO95905 644 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 CCL23P55773 120 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 METTL21CQ5VZV1 264 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 LRRC8DQ7L1W4 858 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 FAM228AQ86W67 206 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 CYP4Z2PQ8N1L4 340 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 TNIP2Q8NFZ5 429 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 USP7Q93009 1102 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 CHMP1AQ9HD42 196 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 RUVBL2Q9Y230 463 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 PRPF3O43395 683 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 CDKL1Q00532 357 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 EML3Q32P44 896 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 WDR72Q3MJ13 1102 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 PPP1R18Q6NYC8 613 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 IZUMO2Q6UXV1 221 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 NT5DC3Q86UY8 548 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 HDDC3Q8N4P3 179 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 DSN1Q9H410 356 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 FAM153AQ9UHL3 310 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 MRPL42Q9Y6G3 142 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 KMOO15229 486 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 AMD1P17707 334 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 ACADLP28330 430 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 PPP2R1BP30154 601 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 CASP4P49662 377 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 CTCFP49711 727 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 LONRF1Q17RB8 773 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 FGD3Q5JSP0 725 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 SETD3Q86TU7 594 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 DHTKD1Q96HY7 919 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 MRPL9Q9BYD2 267 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 KLC4Q9NSK0 619 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 TUBE1Q9UJT0 475 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 TNFSF13BQ9Y275 285 aa11.45□□□□□ -0.58
CACNA1C-217ENST00000399641 OTOL1A6NHN0 477 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 TMCC2O75069 709 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 GNRH1P01148 92 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 NR3C2P08235 984 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 PPM1AP35813 382 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 CDH6P55285 790 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 RAB2AP61019 212 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 PPIDQ08752 370 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 UBE2Q1Q7Z7E8 422 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 C4orf33Q8N1A6 199 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 ATG4CQ96DT6 458 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 DTNBP1Q96EV8 351 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 SIPA1Q96FS4 1042 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 TBCDQ9BTW9 1192 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 RGS18Q9NS28 235 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 FKBP14Q9NWM8 211 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 STX7O15400 261 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 TCF7P36402 384 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 ATF7IP2Q5U623 682 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 C1orf189Q5VU69 101 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 ATG14Q6ZNE5 492 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 MTSS1LQ765P7 747 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 RELL1Q8IUW5 271 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 ATG16L2Q8NAA4 619 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 CYFIP2Q96F07 1278 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 MRPL48Q96GC5 212 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 VPS35Q96QK1 796 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 MKNK1Q9BUB5 465 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 TMEM168Q9H0V1 697 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 CERS4Q9HA82 394 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 ARL2BPQ9Y2Y0 163 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 C2orf71A6NGG8 1288 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 IL2P60568 153 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 CENPCQ03188 943 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 ELAVL2Q12926 359 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 BARGINQ6ZT62 677 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 PJA1Q8NG27 643 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 SH3GLB2Q9NR46 395 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 MRPL17Q9NRX2 175 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 TMEM63CQ9P1W3 806 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 MROH7Q68CQ1 1323 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 SMIM22K7EJ46 135 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 ZBTB22O15209 634 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 PER1O15534 1290 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 GRAP2O75791 330 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 JAK1P23458 1154 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 CDC42EP5Q6NZY7 148 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 NEK6Q9HC98 313 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 TMEM260Q9NX78 707 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 TLR7Q9NYK1 1049 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 LCMT1Q9UIC8 334 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 TSPAN19P0C672 248 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 FSHRP23945 695 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 PYDC2Q56P42 97 aa11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 FBXO16Q8IX29 292 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-217ENST00000399641 GPC2Q8N158 579 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms