RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 RBBP8NLQ8NC74 664 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 SLC30A5Q8TAD4 765 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 SETD7Q8WTS6 366 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 CAPSLQ8WWF8 208 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 SMARCAL1Q9NZC9 954 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 GAS2O43903 313 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 LHX1P48742 406 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 PDK1Q15118 436 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 ESRP1Q6NXG1 681 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 RASAL3Q86YV0 1011 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 RIPOR3Q96MK2 946 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 GRID2IPA4D2P6 1211 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 STRNO43815 780 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 IGSF6O95976 241 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 SPATA31D3P0C874 917 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 SYN1P17600 705 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 ARSEP51690 589 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 GFPT1Q06210 699 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 SPATA31D4Q6ZUB0 917 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 GATAD2AQ86YP4 633 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 TRAPPC5Q8IUR0 188 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 FOXP3Q9BZS1 431 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 MPP6Q9NZW5 540 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 TBC1D3DA0A087WVF3 549 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 TBC1D3IA0A087WXS9 549 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 TBC1D3EA0A087X179 549 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 TBC1D3KA0A087X1G2 549 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 TBC1D3FA6NER0 549 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 TBC1D3LB9A6J9 549 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 TBC1D3HP0C7X1 549 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 CXCR2P25025 360 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 GRK4P32298 578 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 COX10Q12887 443 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 SLC39A12Q504Y0 691 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 TEDDM1Q5T9Z0 273 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 TBC1D3GQ6DHY5 549 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 TBC1D3CQ6IPX1 549 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 RNF44Q7L0R7 432 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 TBC1D3Q8IZP1 549 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 CARD9Q9H257 536 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 MCCC2Q9HCC0 563 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 RAB21Q9UL25 225 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 RASA4BC9J798 803 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 SMAPO00193 183 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 RASA4O43374 803 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 PRKAR2AP13861 404 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 PEX6Q13608 980 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 SPARCL1Q14515 664 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 STAT4Q14765 748 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 TRADDQ15628 312 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 BEND6Q5SZJ8 279 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 NUGGCQ68CJ6 796 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 CALR3Q96L12 384 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 OSBPL9Q96SU4 736 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 ADAM2Q99965 735 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 PHACTR1Q9C0D0 580 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 PRKAB1Q9Y478 270 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 SH3D21A4FU49 640 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 AP3D1O14617 1153 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 EIF3HO15372 352 aaKnown RBP eCLIP11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 BYSLQ13895 437 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 MAPRE2Q15555 327 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 LRRC8BQ6P9F7 803 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 ZNF555Q8NEP9 628 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 HDHD2Q9H0R4 259 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 ALG13Q9NP73 1137 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 SNTG2Q9NY99 539 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 NOP53Q9NZM5 478 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 SLC9A8Q9Y2E8 581 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 SNX24Q9Y343 169 aa11.29□□□□□ -0.6
CACNA1C-216ENST00000399638 CAMSAP1Q5T5Y3 1602 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 A0A088AWK7 358 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 PIPSLA2A3N6 862 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 APODP05090 189 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 ZNF10P21506 573 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 DYNC1I2Q13409 638 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 INAVAQ3KP66 663 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 ACOT1Q86TX2 421 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 LPCAT1Q8NF37 534 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 RERGQ96A58 199 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 SPATC1LQ9H0A9 340 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 DDX43Q9NXZ2 648 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 HCN4Q9Y3Q4 1203 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 A0A1B0GTH6 734 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 CARNS1A5YM72 827 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 SRRM3A6NNA2 597 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 SCAMP3O14828 347 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 MAFKO60675 156 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 GUCY1A3Q02108 690 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 TBC1D10CQ8IV04 446 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 PPP1R13LQ8WUF5 828 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 ADAM33Q9BZ11 813 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 PRKD2Q9BZL6 878 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 VPS9D1Q9Y2B5 631 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 CNPP09543 421 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 NOS3P29474 1203 aa11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 SKIV2L2P42285 1042 aaKnown RBP11.28□□□□□ -0.6
CACNA1C-216ENST00000399638 CDH8P55286 799 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms