RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 CASKO14936 926 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 CDC25CP30307 473 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 FOXK1P85037 733 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 RBM10P98175 930 aaKnown RBP5.16□□□□□ -1.58
TTC3-204ENST00000399017 CACNB2Q08289 660 aaPredicted RBP5.16□□□□□ -1.58
TTC3-204ENST00000399017 UBE2R2Q712K3 238 aaPredicted RBP5.16□□□□□ -1.58
TTC3-204ENST00000399017 ZNF677Q86XU0 584 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 FAM151AQ8WW52 585 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 P2RX5Q93086 422 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 FUT8Q9BYC5 575 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 PUS7LQ9H0K6 701 aaKnown RBP5.16□□□□□ -1.58
TTC3-204ENST00000399017 RUSC2Q8N2Y8 1516 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 GTPBP1O00178 669 aaKnown RBP5.16□□□□□ -1.58
TTC3-204ENST00000399017 DIAPH2O60879 1101 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 SIN3BO75182 1162 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 IFNA16P05015 189 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 CSH1P0DML2 217 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 CSH2P0DML3 217 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 FANCCQ00597 558 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 INTS11Q5TA45 600 aaKnown RBP5.16□□□□□ -1.58
TTC3-204ENST00000399017 LYPLAL1Q5VWZ2 237 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 LPCAT2Q7L5N7 544 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 CHPFQ8IZ52 775 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 CARNMT1Q8N4J0 409 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 SNX21Q969T3 373 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 TUBGCP3Q96CW5 907 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 SAMD11Q96NU1 681 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 VTA1Q9NP79 307 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 ZFC3H1O60293 1989 aaKnown RBP5.16□□□□□ -1.58
TTC3-204ENST00000399017 AP3D1O14617 1153 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 FBXO21O94952 628 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 CCNYL3P0C7X3 344 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 RFX3P48380 749 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 LONRF1Q17RB8 773 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 TSHZ3Q63HK5 1081 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 SERPINA13PQ6UXR4 307 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 SETD3Q86TU7 594 aaPredicted RBP5.16□□□□□ -1.58
TTC3-204ENST00000399017 PHYKPLQ8IUZ5 450 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 USP33Q8TEY7 942 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 CPNE2Q96FN4 548 aaPredicted RBP5.16□□□□□ -1.58
TTC3-204ENST00000399017 UROC1Q96N76 676 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 VPS35Q96QK1 796 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 GPR88Q9GZN0 384 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 ZMYND12Q9H0C1 365 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 SAP130Q9H0E3 1048 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 CHORDC1Q9UHD1 332 aaPredicted RBP5.16□□□□□ -1.58
TTC3-204ENST00000399017 FAM170AA1A519 330 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 FAM220BPB1ANY3 271 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 KMOO15229 486 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 SPAG6O75602 509 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 ALPPP05187 535 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 SERPINA4P29622 427 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 ELK3P41970 407 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 ATF7IP2Q5U623 682 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 SLC9A4Q6AI14 798 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 CHADLQ6NUI6 762 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 LRRC49Q8IUZ0 686 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 ICA1LQ8NDH6 482 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 GPKOWQ92917 476 aaPredicted RBP eCLIP5.16□□□□□ -1.583e-8■□□□□ 10.5
TTC3-204ENST00000399017 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.16□□□□□ -1.582e-10■□□□□ 9.5
TTC3-204ENST00000399017 KLHL20Q9Y2M5 609 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 SCN2AQ99250 2005 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 GNG14A0A1W2PPG7 69 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 ZBTB14O43829 449 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 HLA-DQA2P01906 255 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 GSTM1P09488 218 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 FGRP09769 529 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 ADD2P35612 726 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 SLC16A2P36021 539 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 TSC22D1Q15714 1073 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 C11orf74Q86VG3 221 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 ZC3HC1Q86WB0 502 aaKnown RBP5.16□□□□□ -1.58
TTC3-204ENST00000399017 PARP9Q8IXQ6 854 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 ANKRD13CQ8N6S4 541 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 PRKAG3Q9UGI9 489 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 TMPRSS11EQ9UL52 423 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 KCNJ14Q9UNX9 436 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 ASCC3Q8N3C0 2202 aaKnown RBP5.16□□□□□ -1.58
TTC3-204ENST00000399017 CLDN4O14493 209 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 KCNN4O15554 427 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 CHP2O43745 196 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 MECP2P51608 486 aaKnown RBP5.16□□□□□ -1.58
TTC3-204ENST00000399017 NLRP11P59045 1033 aaKnown RBP5.16□□□□□ -1.58
TTC3-204ENST00000399017 PTF1AQ7RTS3 328 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 TAB3Q8N5C8 712 aaPredicted RBP5.16□□□□□ -1.58
TTC3-204ENST00000399017 HAVCR1Q96D42 359 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 ELOVL4Q9GZR5 314 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 NKIRAS2Q9NYR9 191 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 AGAP1Q9UPQ3 857 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 AKAP12Q02952 1782 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 ZNF407Q9C0G0 2248 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 PPP1R3GB7ZBB8 358 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 GJB1P08034 283 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 HSD3B2P26439 372 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 RCAN1P53805 252 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 BCAT1P54687 386 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 RBPJQ06330 500 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 SLC15A2Q16348 729 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 PRR5LQ6MZQ0 368 aa5.16□□□□□ -1.58
TTC3-204ENST00000399017 SARM1Q6SZW1 724 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms