RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 UBE2HP62256 183 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 MRPS21P82921 87 aaKnown RBP14.1□□□□□ -0.15
VCX3A-202ENST00000398729 LRMPQ12912 555 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 PAK1Q13153 545 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 ANO4Q32M45 955 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 AASDHQ4L235 1098 aaPredicted RBP14.1□□□□□ -0.15
VCX3A-202ENST00000398729 SGO2Q562F6 1265 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 C2orf27AQ580R0 203 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 PLA2G2CQ5R387 149 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 C10orf120Q5SQS8 335 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 STPG1Q5TH74 334 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 HTR3DQ70Z44 454 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 PIGZQ86VD9 579 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 C12orf40Q86WS4 652 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 ARHGAP18Q8N392 663 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 ZNF276Q8N554 614 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 TRIML1Q8N9V2 468 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 WBP2Q969T9 261 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 NT5C1BQ96P26 610 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 SMOC1Q9H4F8 434 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 ARHGEF4Q9NR80 690 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 SPHK2Q9NRA0 654 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 POLR3BQ9NW08 1133 aaPredicted RBP14.1□□□□□ -0.15
VCX3A-202ENST00000398729 CLIC5Q9NZA1 410 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 HESX1Q9UBX0 185 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 NUDT5Q9UKK9 219 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 TSPAN16Q9UKR8 245 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 DMXL2Q8TDJ6 3036 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 PKD1L2Q7Z442 2459 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 A0A0A0MRY4 1105 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 P4HA2O15460 535 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 HOXC11O43248 304 aaPredicted RBP14.09□□□□□ -0.15
VCX3A-202ENST00000398729 KCNK5O95279 499 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 FGFR1OPO95684 399 aaKnown RBP14.09□□□□□ -0.15
VCX3A-202ENST00000398729 VDRP11473 427 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 GRIA2P42262 883 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 STX17P56962 302 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 KDSRQ06136 332 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 GOLGA7BQ2TAP0 167 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 NUDT18Q6ZVK8 323 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 SCD5Q86SK9 330 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 TTC30AQ86WT1 665 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 TMEM25Q86YD3 366 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 NAT16Q8N8M0 369 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 LOXL4Q96JB6 756 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 LSM14BQ9BX40 385 aaKnown RBP14.09□□□□□ -0.15
VCX3A-202ENST00000398729 DEC1Q9P2X7 70 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 EBF1Q9UH73 591 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 KIAA1257Q9ULG3 409 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 LAMA5O15230 3695 aa14.09□□□□□ -0.15
VCX3A-202ENST00000398729 TBC1D3BA6NDS4 549 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 XPO1O14980 1071 aaKnown RBP14.08□□□□□ -0.16
VCX3A-202ENST00000398729 MDM4O15151 490 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 GREM1O60565 184 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 TULP3O75386 442 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 EPN2O95208 641 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 TNFRSF4P43489 277 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 TKTL1P51854 596 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 COG7P83436 770 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 PDE4CQ08493 712 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 BST2Q10589 180 aaKnown RBP14.08□□□□□ -0.16
VCX3A-202ENST00000398729 CAMK4Q16566 473 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 HSF5Q4G112 596 aaPredicted RBP14.08□□□□□ -0.16
VCX3A-202ENST00000398729 RAB41Q5JT25 222 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 TMEM270Q6UE05 265 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 CACNA2D4Q7Z3S7 1137 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 MIB1Q86YT6 1006 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 ETFBKMTQ8IXQ9 262 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 PPM1KQ8N3J5 372 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 CCDC33Q8N5R6 958 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 UBR7Q8N806 425 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 TSTD1Q8NFU3 115 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 SRRTQ9BXP5 876 aaKnown RBP14.08□□□□□ -0.16
VCX3A-202ENST00000398729 LRRC4Q9HBW1 653 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 KIAA1468Q9P260 1216 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 RASAL2Q9UJF2 1139 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 MMP17Q9ULZ9 603 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 PCDHB4Q9Y5E5 795 aa14.08□□□□□ -0.16
VCX3A-202ENST00000398729 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.08□□□□□ -0.16
VCX3A-202ENST00000398729 O00370 1275 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 STC2O76061 302 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 ZBED1O96006 694 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 AFPP02771 609 aaKnown RBP14.07□□□□□ -0.16
VCX3A-202ENST00000398729 PROS1P07225 676 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 PAEPP09466 180 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 SETSIPP0DME0 302 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 TIE1P35590 1138 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 DGKEP52429 567 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 MARSP56192 900 aaKnown RBP14.07□□□□□ -0.16
VCX3A-202ENST00000398729 YWHAGP61981 247 aaKnown RBP eCLIP14.07□□□□□ -0.16
VCX3A-202ENST00000398729 MESP2Q0VG99 397 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 EFEMP1Q12805 493 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 KCNH2Q12809 1159 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 CRY1Q16526 586 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 TPGS1Q6ZTW0 290 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 RSRC2Q7L4I2 434 aaKnown RBP14.07□□□□□ -0.16
VCX3A-202ENST00000398729 SFTPA1Q8IWL2 248 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 TRIM59Q8IWR1 403 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 PHTF2Q8N3S3 785 aa14.07□□□□□ -0.16
VCX3A-202ENST00000398729 ALLCQ8N6M5 410 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms