RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 SLC35C1Q96A29 364 aa11.9□□□□□ -0.5
PCDHGA8-201ENST00000398604 FICDQ9BVA6 458 aa11.9□□□□□ -0.5
PCDHGA8-201ENST00000398604 HMX1Q9NP08 348 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA8-201ENST00000398604 ANKRD63C9JTQ0 380 aa11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 SH3BGRLO75368 114 aa11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 PROSCO94903 275 aa11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 ARIH2O95376 493 aa11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 GJB1P08034 283 aa11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 FGFR1P11362 822 aa11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 GZMAP12544 262 aa11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 GEMIN4P57678 1058 aaKnown RBP11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 WASHC5Q12768 1159 aa11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 MFSD10Q14728 455 aa11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 TRADDQ15628 312 aa11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 GALNTL6Q49A17 601 aa11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 PAPD7Q5XG87 772 aaKnown RBP11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 PRPF39Q86UA1 669 aaKnown RBP11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 ABRAQ8N0Z2 381 aa11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 SEC16BQ96JE7 1060 aa11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 SRPK1Q96SB4 655 aaKnown RBP11.9□□□□□ -0.51
PCDHGA8-201ENST00000398604 hCG_2014768A0A024R1R8 64 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 SDR42E2A6NKP2 422 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 CLASP2O75122 1294 aaKnown RBP11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 RECQL4O94761 1208 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 CCR1P32246 355 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 WDR49Q8IV35 697 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 PHACTR4Q8IZ21 702 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 ARHGAP18Q8N392 663 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 OR9Q1Q8NGQ5 310 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 MTG1Q9BT17 334 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 PABPC3Q9H361 631 aaKnown RBP11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 OLFML3Q9NRN5 406 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 BLOC1S4Q9NUP1 217 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 RUVBL2Q9Y230 463 aaKnown RBP11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 ACKR2O00590 384 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 LHX1P48742 406 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 EPHB3P54753 998 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 GEMP55040 296 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 CSHL1Q14406 222 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 TTC39BQ5VTQ0 682 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 AP1ARQ63HQ0 302 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 ERAP2Q6P179 960 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 PCYOX1LQ8NBM8 494 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 EXOSC4Q9NPD3 245 aaKnown RBP11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 GPRC5DQ9NZD1 345 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 DTNAQ9Y4J8 743 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 H7C4K7 107 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 TFE3P19532 575 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 RHBDL3P58872 404 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 YWHAZP63104 245 aaKnown RBP11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 OCA2Q04671 838 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 SLC27A1Q6PCB7 646 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 LINC00523Q86TU6 105 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 HDAC7Q8WUI4 952 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 TSC22D3Q99576 134 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 SEMA4AQ9H3S1 761 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 RAB21Q9UL25 225 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 PCDHB12Q9Y5F1 795 aa11.89□□□□□ -0.51
PCDHGA8-201ENST00000398604 KLRG2A4D1S0 409 aaPredicted RBP11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 MANSC4A6NHS7 340 aaPredicted RBP11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 SPAG6O75602 509 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 SOAT2O75908 522 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 UBA1P22314 1058 aaKnown RBP11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 OR1E1P30953 314 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 TTLL9Q3SXZ7 439 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 MARC1Q5VT66 337 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 FOXR1Q6PIV2 292 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 SPOCD1Q6ZMY3 1216 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 STRA8Q7Z7C7 330 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 PARP9Q8IXQ6 854 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 DEFB106AQ8N104 65 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 PHF21BQ96EK2 531 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 CLPBQ9H078 707 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 KLC4Q9NSK0 619 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 BARX2Q9UMQ3 279 aaPredicted RBP11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 STRCP1A6NGW2 1772 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 SCNN1GP51170 649 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 CASP5P51878 434 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 BST2Q10589 180 aaKnown RBP11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 LAMB3Q13751 1172 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 PTGISQ16647 500 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 SHROOM1Q2M3G4 852 aaPredicted RBP11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 TRPM8Q7Z2W7 1104 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 COLGALT1Q8NBJ5 622 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 ECSITQ9BQ95 431 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 PIF1Q9H611 641 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 SAE1Q9UBE0 346 aaPredicted RBP11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 CDV3Q9UKY7 258 aaKnown RBP11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 CDYLQ9Y232 598 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 EVPLLA8MZ36 301 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 WNT7AO00755 349 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 PEX10O60683 326 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 ATP9AO75110 1047 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 CYP2F1P24903 491 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 FNTAP49354 379 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 CBWD6Q4V339 395 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 CBWD3Q5JTY5 395 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 CBWD5Q5RIA9 395 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 WDR59Q6PJI9 974 aa11.88□□□□□ -0.51
PCDHGA8-201ENST00000398604 SH3RF1Q7Z6J0 888 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms