RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 TTLL6Q8N841 843 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 HPDLQ96IR7 371 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 PRPF18Q99633 342 aaKnown RBP11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 HAUS8Q9BT25 410 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 NT5C1AQ9BXI3 368 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ST6GALNAC4Q9H4F1 302 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 DMAP1Q9NPF5 467 aaPredicted RBP11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SLC39A10Q9ULF5 831 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CACNA1SQ13698 1873 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 MAGEB2O15479 319 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 LYPLA2O95372 231 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SERPINE1P05121 402 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TAF5Q15542 800 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 LRRC8EQ6NSJ5 796 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SEPT1Q8WYJ6 367 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 GRIP2Q9C0E4 1043 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 NDUFA13Q9P0J0 144 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 DCDC2Q9UHG0 476 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SDR42E2A6NKP2 422 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 GIPC1O14908 333 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 GM2AP17900 193 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 MSX2P35548 267 aaPredicted RBP11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 USP10Q14694 798 aaKnown RBP11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 KRT72Q14CN4 511 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 PDK3Q15120 406 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 GOLGA7BQ2TAP0 167 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 LIN52Q52LA3 116 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SIX6OS1Q8N1H7 587 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CRYGNQ8WXF5 182 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 PRR11Q96HE9 360 aaPredicted RBP11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 MIPEPQ99797 713 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 AURKCQ9UQB9 309 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 PLLPQ9Y342 182 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ALS2Q96Q42 1657 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SLIT2O94813 1529 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CCDC189A1A4V9 331 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TYROBPO43914 113 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ZNF862O60290 1169 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 T-ENOLP0DO92 83 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 PMLP29590 882 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SOX11P35716 441 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 PKNOX1P55347 436 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 KLF1Q13351 362 aaPredicted RBP11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 KIF19Q2TAC6 998 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 JADE1Q6IE81 842 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 APOL2Q9BQE5 337 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 MRPL1Q9BYD6 325 aaKnown RBP11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ILKAPQ9H0C8 392 aaPredicted RBP11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 RNPEPQ9H4A4 650 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ETNK2Q9NVF9 386 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ADAMTS7Q9UKP4 1686 aa11.48□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TBC1D12O60347 775 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SRGAP2BP0DMP2 458 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 RARBP10826 455 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 MCF2P10911 925 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 GRK2P25098 689 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 PHKA2P46019 1235 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 PHEXP78562 749 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 MXD4Q14582 209 aaPredicted RBP11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TCEAL1Q15170 157 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 XRRA1Q6P2D8 792 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 BNC2Q6ZN30 1099 aaPredicted RBP11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 KDELC2Q7Z4H8 507 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 DENND1AQ8TEH3 1009 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TMEM176AQ96HP8 235 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 NRDE2Q9H7Z3 1164 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 HOXC10Q9NYD6 342 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SLC7A8Q9UHI5 535 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CLUHO75153 1309 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 KIF13AQ9H1H9 1805 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 MICAL2O94851 1124 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SERPINA6P08185 405 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 THRAP10827 490 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 GNAZP19086 355 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CYP2F1P24903 491 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TUBP50607 506 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 HDAC4P56524 1084 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 PEX6Q13608 980 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 OASLQ15646 514 aaKnown RBP11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TMEM259Q4ZIN3 620 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SPDYAQ5MJ70 313 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TRIM67Q6ZTA4 783 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ACOT1Q86TX2 421 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 GABPB2Q8TAK5 448 aaPredicted RBP11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TUBGCP5Q96RT8 1024 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CDRT15Q96T59 188 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 EBF4Q9BQW3 602 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 UNKQ9C0B0 810 aaKnown RBP11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 FAM49AQ9H0Q0 323 aaPredicted RBP11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 COPS7BQ9H9Q2 264 aaPredicted RBP11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 MYH11P35749 1972 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 E5RJQ4 531 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TGDSO95455 350 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ASS1P00966 412 aaKnown RBP11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 FAM200BP0CF97 657 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ZBTB48P10074 688 aaPredicted RBP11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 HSPA8P11142 646 aaKnown RBP11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TCF7P36402 384 aaPredicted RBP11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 MLH1P40692 756 aa11.47□□□□□ -0.57
CSGALNACT1-202ENST00000397998 RTP1P59025 263 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms