RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 ZDHHC14Q8IZN3 488 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 STKLD1Q8NE28 680 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 GPR152Q8TDT2 470 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 EDEM1Q92611 657 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 MYRFLQ96LU7 910 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 HERPUD2Q9BSE4 406 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 OSBPL8Q9BZF1 889 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 SMOC2Q9H3U7 446 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 WDR6Q9NNW5 1121 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 ALG13Q9NP73 1137 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 CLIC5Q9NZA1 410 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 YIPF1Q9Y548 306 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 LRRD1A4D1F6 860 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 CXCL14O95715 111 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 C1RP00736 705 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 F9P00740 461 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 CA3P07451 260 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 ATXN1P54253 815 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 AIF1P55008 147 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 ERVK-21P61565 698 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 IFRD2Q12894 506 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 TFDP3Q5H9I0 405 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 KCNT1Q5JUK3 1230 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 BTBD8Q5XKL5 378 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 SPRED2Q7Z698 418 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 ZNF276Q8N554 614 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 MRPL43Q8N983 215 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 DQX1Q8TE96 717 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 POF1BQ8WVV4 589 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 RNF25Q96BH1 459 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 KLHL5Q96PQ7 755 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 SNRNP25Q9BV90 132 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 PRO3102Q9H379 93 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 CYP4F11Q9HBI6 524 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 PIGVQ9NUD9 493 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 KLHL11Q9NVR0 708 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 TMEM51Q9NW97 253 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 OSER1Q9NX31 292 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 GMIPQ9P107 970 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 NR2E1Q9Y466 385 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 hCG_1818297A0A087WSY0 165 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 UQCRHLA0A096LP55 91 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 A0A1W2PQH9 124 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 C2orf71A6NGG8 1288 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 ZNF487B1APH4 448 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 PI4K2BG5E9Z4 385 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 KRIT1O00522 736 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 ADH1AP07327 375 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 UQCRHP07919 91 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 RALAP11233 206 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 HMGA1P17096 107 aaKnown RBP20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 CETN2P41208 172 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 CXCR3P49682 368 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 DEUP1Q05D60 604 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 TAF10Q12962 218 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 MTMR3Q13615 1198 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 CAMK1Q14012 370 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 SMC1AQ14683 1233 aaKnown RBP20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 PDK2Q15119 407 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 CYP1B1Q16678 543 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 ERMARDQ5T6L9 678 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 SCYL2Q6P3W7 929 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 CCDC50Q8IVM0 306 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 SLC7A14Q8TBB6 771 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 OVCA2Q8WZ82 227 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 UBXN4Q92575 508 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 FBXO32Q969P5 355 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 NTAN1Q96AB6 310 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 ACSF2Q96CM8 615 aaPredicted RBP20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 TRMT2BQ96GJ1 504 aaKnown RBP20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 TGS1Q96RS0 853 aaKnown RBP20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 TCF25Q9BQ70 676 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 TLR9Q9NR96 1032 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 INSL5Q9Y5Q6 135 aa20.29■□□□□ 0.84
PDLIM2-205ENST00000397761 TCRBV7S2A1N4TA0A589 114 aa20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 CSH1P0DML2 217 aa20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 CSH2P0DML3 217 aa20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 SCAPQ12770 1279 aa20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 DPYSL2Q16555 572 aa20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 ERCC6LQ2NKX8 1250 aa20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 SNX30Q5VWJ9 437 aa20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 TAC4Q86UU9 113 aa20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 DOCK4Q8N1I0 1966 aa20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 CCDC185Q8N715 623 aa20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 C12orf50Q8NA57 414 aaPredicted RBP20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 GIPC2Q8TF65 315 aa20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 MAIP1Q8WWC4 291 aa20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 AP1M1Q9BXS5 423 aa20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 UBE2OQ9C0C9 1292 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 TLR8Q9NR97 1041 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 FBXW11Q9UKB1 542 aa20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 YBX2Q9Y2T7 364 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-205ENST00000397761 DOCK6Q96HP0 2047 aa20.27■□□□□ 0.84
PDLIM2-205ENST00000397761 TGM5O43548 720 aa20.27■□□□□ 0.84
PDLIM2-205ENST00000397761 ELF1P32519 619 aa20.27■□□□□ 0.84
PDLIM2-205ENST00000397761 ALDH1A3P47895 512 aa20.27■□□□□ 0.84
PDLIM2-205ENST00000397761 TEX35Q5T0J7 233 aa20.27■□□□□ 0.84
PDLIM2-205ENST00000397761 FAM131BQ86XD5 332 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms