RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 MAOBP27338 520 aa17.03■□□□□ 0.32
CUX2-202ENST00000397643 GLRX5Q86SX6 157 aa17.03■□□□□ 0.32
CUX2-202ENST00000397643 SLCO6A1Q86UG4 719 aa17.03■□□□□ 0.32
CUX2-202ENST00000397643 RGL4Q8IZJ4 473 aa17.03■□□□□ 0.32
CUX2-202ENST00000397643 CCDC127Q96BQ5 260 aa17.03■□□□□ 0.32
CUX2-202ENST00000397643 BBS2Q9BXC9 721 aa17.03■□□□□ 0.32
CUX2-202ENST00000397643 KLF16Q9BXK1 252 aaPredicted RBP17.03■□□□□ 0.32
CUX2-202ENST00000397643 VRTNQ9H8Y1 702 aa17.03■□□□□ 0.32
CUX2-202ENST00000397643 PCOLCE2Q9UKZ9 415 aa17.03■□□□□ 0.32
CUX2-202ENST00000397643 WASH3PC4AMC7 463 aa17.02■□□□□ 0.32
CUX2-202ENST00000397643 BEST1O76090 585 aa17.02■□□□□ 0.32
CUX2-202ENST00000397643 ATICP31939 592 aa17.02■□□□□ 0.32
CUX2-202ENST00000397643 ME1P48163 572 aa17.02■□□□□ 0.32
CUX2-202ENST00000397643 CDH8P55286 799 aa17.02■□□□□ 0.32
CUX2-202ENST00000397643 STXBP4Q6ZWJ1 553 aa17.02■□□□□ 0.32
CUX2-202ENST00000397643 MDM1Q8TC05 714 aa17.02■□□□□ 0.32
CUX2-202ENST00000397643 ZNF507Q8TCN5 953 aa17.02■□□□□ 0.32
CUX2-202ENST00000397643 DNASE2BQ8WZ79 361 aa17.02■□□□□ 0.32
CUX2-202ENST00000397643 FOXJ1Q92949 421 aa17.02■□□□□ 0.32
CUX2-202ENST00000397643 SMARCD1Q96GM5 515 aa17.02■□□□□ 0.32
CUX2-202ENST00000397643 SMOQ99835 787 aa17.02■□□□□ 0.32
CUX2-202ENST00000397643 SDCBP2Q9H190 292 aa17.02■□□□□ 0.32
CUX2-202ENST00000397643 CCDC86Q9H6F5 360 aaKnown RBP17.02■□□□□ 0.32
CUX2-202ENST00000397643 KRT82Q9NSB4 513 aa17.02■□□□□ 0.32
CUX2-202ENST00000397643 COMMD8Q9NX08 183 aa17.02■□□□□ 0.32
CUX2-202ENST00000397643 NFE2L3Q9Y4A8 694 aa17.02■□□□□ 0.32
CUX2-202ENST00000397643 SETXQ7Z333 2677 aaKnown RBP17.02■□□□□ 0.31
CUX2-202ENST00000397643 ATP8B3O60423 1300 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 KNL1Q8NG31 2342 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 GFRA2O00451 464 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 AP1G2O75843 785 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 CYP2J2P51589 502 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 E2F4Q16254 413 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 WDR45BQ5MNZ6 344 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 SYCP2LQ5T4T6 812 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 SDE2Q6IQ49 451 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 TPGS1Q6ZTW0 290 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 METTL3Q86U44 580 aaKnown RBP17.01■□□□□ 0.31
CUX2-202ENST00000397643 PDILTQ8N807 584 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 BAHD1Q8TBE0 780 aaPredicted RBP17.01■□□□□ 0.31
CUX2-202ENST00000397643 PLEKHO2Q8TD55 490 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 SCFD1Q8WVM8 642 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 SYAP1Q96A49 352 aaPredicted RBP17.01■□□□□ 0.31
CUX2-202ENST00000397643 ELMO3Q96BJ8 720 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 BBC3Q96PG8 261 aaPredicted RBP17.01■□□□□ 0.31
CUX2-202ENST00000397643 GBP4Q96PP9 640 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 XPO6Q96QU8 1125 aaKnown RBP17.01■□□□□ 0.31
CUX2-202ENST00000397643 MED10Q9BTT4 135 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 ZDHHC5Q9C0B5 715 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 TNMDQ9H2S6 317 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 IL21RQ9HBE5 538 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 CYLDQ9NQC7 956 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 KBTBD4Q9NVX7 518 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 OSER1Q9NX31 292 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 TOR4AQ9NXH8 423 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 USP36Q9P275 1121 aaKnown RBP17.01■□□□□ 0.31
CUX2-202ENST00000397643 WDR35Q9P2L0 1181 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 PCDHB9Q9Y5E1 797 aa17.01■□□□□ 0.31
CUX2-202ENST00000397643 HELZ2Q9BYK8 2649 aaKnown RBP17.01■□□□□ 0.31
CUX2-202ENST00000397643 A0A1B0GTW7 788 aa17■□□□□ 0.31
CUX2-202ENST00000397643 CLIC2O15247 247 aa17■□□□□ 0.31
CUX2-202ENST00000397643 ZBTB24O43167 697 aaPredicted RBP17■□□□□ 0.31
CUX2-202ENST00000397643 CUTAO60888 179 aa17■□□□□ 0.31
CUX2-202ENST00000397643 NDUFS2O75306 463 aa17■□□□□ 0.31
CUX2-202ENST00000397643 DKK1O94907 266 aa17■□□□□ 0.31
CUX2-202ENST00000397643 GNSP15586 552 aa17■□□□□ 0.31
CUX2-202ENST00000397643 CD6P30203 668 aa17■□□□□ 0.31
CUX2-202ENST00000397643 DGKGP49619 791 aa17■□□□□ 0.31
CUX2-202ENST00000397643 BNC1Q01954 994 aa17■□□□□ 0.31
CUX2-202ENST00000397643 TRPC3Q13507 836 aa17■□□□□ 0.31
CUX2-202ENST00000397643 FUT11Q495W5 492 aa17■□□□□ 0.31
CUX2-202ENST00000397643 KIAA1324Q6UXG2 1013 aaKnown RBP17■□□□□ 0.31
CUX2-202ENST00000397643 Q6ZNB5 142 aa17■□□□□ 0.31
CUX2-202ENST00000397643 ZCCHC9Q8N567 271 aaKnown RBP17■□□□□ 0.31
CUX2-202ENST00000397643 XXYLT1Q8NBI6 393 aa17■□□□□ 0.31
CUX2-202ENST00000397643 TOE1Q96GM8 510 aaKnown RBP17■□□□□ 0.31
CUX2-202ENST00000397643 MKRN2Q9H000 416 aaKnown RBP17■□□□□ 0.31
CUX2-202ENST00000397643 NACA2Q9H009 215 aa17■□□□□ 0.31
CUX2-202ENST00000397643 CSNK1G1Q9HCP0 422 aa17■□□□□ 0.31
CUX2-202ENST00000397643 WSB2Q9NYS7 404 aaPredicted RBP17■□□□□ 0.31
CUX2-202ENST00000397643 FBXO10Q9UK96 956 aa17■□□□□ 0.31
CUX2-202ENST00000397643 APOBEC2Q9Y235 224 aaKnown RBP17■□□□□ 0.31
CUX2-202ENST00000397643 RAXQ9Y2V3 346 aa17■□□□□ 0.31
CUX2-202ENST00000397643 URB1O60287 2271 aaKnown RBP16.99■□□□□ 0.31
CUX2-202ENST00000397643 CABIN1Q9Y6J0 2220 aa16.99■□□□□ 0.31
CUX2-202ENST00000397643 KCNJ18B7U540 433 aa16.99■□□□□ 0.31
CUX2-202ENST00000397643 NCAM1P13591 858 aa16.99■□□□□ 0.31
CUX2-202ENST00000397643 CCDC130P13994 396 aa16.99■□□□□ 0.31
CUX2-202ENST00000397643 CASP4P49662 377 aa16.99■□□□□ 0.31
CUX2-202ENST00000397643 EHHADHQ08426 723 aa16.99■□□□□ 0.31
CUX2-202ENST00000397643 ENPP2Q13822 863 aa16.99■□□□□ 0.31
CUX2-202ENST00000397643 FAM26FQ5R3K3 315 aa16.99■□□□□ 0.31
CUX2-202ENST00000397643 SCARA5Q6ZMJ2 495 aa16.99■□□□□ 0.31
CUX2-202ENST00000397643 CLEC17AQ6ZS10 378 aa16.99■□□□□ 0.31
CUX2-202ENST00000397643 GPRIN1Q7Z2K8 1008 aa16.99■□□□□ 0.31
CUX2-202ENST00000397643 ACOT1Q86TX2 421 aa16.99■□□□□ 0.31
CUX2-202ENST00000397643 GDPD2Q9HCC8 539 aa16.99■□□□□ 0.31
CUX2-202ENST00000397643 TLR8Q9NR97 1041 aaKnown RBP16.99■□□□□ 0.31
CUX2-202ENST00000397643 KIAA1522Q9P206 1035 aaPredicted RBP16.99■□□□□ 0.31
CUX2-202ENST00000397643 HMGXB4Q9UGU5 601 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms