RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 SIX4Q9UIU6 781 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 STARD13Q9Y3M8 1113 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 MYO9AB2RTY4 2548 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 CBX4O00257 560 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 HOXC11O43248 304 aaPredicted RBP10.01□□□□□ -0.81
NEDD9-203ENST00000397378 PCDHGA12O60330 932 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 CDK4P11802 303 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 MYF5P13349 255 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 GARTP22102 1010 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 LMO2P25791 158 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 AFF3P51826 1226 aaKnown RBP10.01□□□□□ -0.81
NEDD9-203ENST00000397378 VAC14Q08AM6 782 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 DNAJC3Q13217 504 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 TEAD4Q15561 434 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 LY6G5CQ5SRR4 150 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 SCARA3Q6AZY7 606 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 TERB1Q8NA31 727 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 MYCBPAPQ8TBZ2 947 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 LARP4BQ92615 738 aaKnown RBP10.01□□□□□ -0.81
NEDD9-203ENST00000397378 C8orf48Q96LL4 319 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 ACOX2Q99424 681 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 CD248Q9HCU0 757 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 RBAKQ9NYW8 714 aaPredicted RBP10.01□□□□□ -0.81
NEDD9-203ENST00000397378 SEL1LQ9UBV2 794 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 SRPK3Q9UPE1 567 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 EXOC7Q9UPT5 735 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 KIF3AQ9Y496 699 aa10.01□□□□□ -0.81
NEDD9-203ENST00000397378 UBR5O95071 2799 aaPredicted RBP10.01□□□□□ -0.81
NEDD9-203ENST00000397378 CKAP5Q14008 2032 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 METTL12A8MUP2 240 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 F8VP50 259 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 H0Y8X5 98 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 TERTO14746 1132 aaKnown RBP10□□□□□ -0.81
NEDD9-203ENST00000397378 KLK10O43240 276 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 TULP3O75386 442 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 KRT38O76015 456 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 LDOC1O95751 146 aaPredicted RBP10□□□□□ -0.81
NEDD9-203ENST00000397378 KRT19P08727 400 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 TMEM191BP0C7N4 346 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 MBL2P11226 248 aaPredicted RBP10□□□□□ -0.81
NEDD9-203ENST00000397378 WARSP23381 471 aaKnown RBP10□□□□□ -0.81
NEDD9-203ENST00000397378 DDIT3P35638 169 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 PSMC1P62191 440 aaKnown RBP10□□□□□ -0.81
NEDD9-203ENST00000397378 CYP27A1Q02318 531 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 KCNA1Q09470 495 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 TAF10Q12962 218 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 TDRD10Q5VZ19 366 aaKnown RBP10□□□□□ -0.81
NEDD9-203ENST00000397378 KIAA1614Q5VZ46 1190 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 MCTP1Q6DN14 999 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 FBXL19Q6PCT2 694 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 ATG14Q6ZNE5 492 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 SFR1Q86XK3 245 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 ZSWIM2Q8NEG5 633 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 KCNE4Q8WWG9 221 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 IGSF8Q969P0 613 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 SAAL1Q96ER3 474 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 PCED1BQ96HM7 432 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 CNDP2Q96KP4 475 aaKnown RBP10□□□□□ -0.81
NEDD9-203ENST00000397378 SLITRK1Q96PX8 696 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10□□□□□ -0.81
NEDD9-203ENST00000397378 MTMR12Q9C0I1 747 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 HCN2Q9UL51 889 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 ANKRD6Q9Y2G4 727 aa10□□□□□ -0.81
NEDD9-203ENST00000397378 TP53BP1Q12888 1972 aaPredicted RBP9.99□□□□□ -0.81
NEDD9-203ENST00000397378 ABL1P00519 1130 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 C1SP09871 688 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 GLDCP23378 1020 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 LONP1P36776 959 aaKnown RBP9.99□□□□□ -0.81
NEDD9-203ENST00000397378 NFKB2Q00653 900 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 UBAP2LQ14157 1087 aaKnown RBP9.99□□□□□ -0.81
NEDD9-203ENST00000397378 ANO4Q32M45 955 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 L1TD1Q5T7N2 865 aaKnown RBP9.99□□□□□ -0.81
NEDD9-203ENST00000397378 LAYNQ6UX15 382 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 DHX40Q8IX18 779 aaKnown RBP9.99□□□□□ -0.81
NEDD9-203ENST00000397378 PDZD8Q8NEN9 1154 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 SCFD1Q8WVM8 642 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 OVCA2Q8WZ82 227 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 HPDLQ96IR7 371 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 ANKRD36BP1Q96IX9 119 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 FAM84AQ96KN4 292 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 ACCSQ96QU6 501 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 GABRG3Q99928 467 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 MRPL44Q9H9J2 332 aaKnown RBP9.99□□□□□ -0.81
NEDD9-203ENST00000397378 PDE11AQ9HCR9 933 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 SPHK2Q9NRA0 654 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 INTS13Q9NVM9 706 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 USP36Q9P275 1121 aaKnown RBP9.99□□□□□ -0.81
NEDD9-203ENST00000397378 CLCA2Q9UQC9 943 aa9.99□□□□□ -0.81
NEDD9-203ENST00000397378 R3HCC1Q9Y3T6 440 aaKnown RBP9.99□□□□□ -0.81
NEDD9-203ENST00000397378 NUMA1Q14980 2115 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 KCNJ18B7U540 433 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 KIAA0391O15091 583 aaKnown RBP9.98□□□□□ -0.81
NEDD9-203ENST00000397378 TRIM24O15164 1050 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 COCHO43405 550 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 BMP15O95972 392 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 PDGFRBP09619 1106 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 FAM163BP0C2L3 166 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 GAP43P17677 238 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 ACADVLP49748 655 aa9.98□□□□□ -0.81
NEDD9-203ENST00000397378 TUBP50607 506 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms