RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 DLATP10515 647 aaKnown RBP15.82■□□□□ 0.12
SEC13-206ENST00000397102 TNNI1P19237 187 aa15.82■□□□□ 0.12
SEC13-206ENST00000397102 TXLNAP40222 546 aa15.82■□□□□ 0.12
SEC13-206ENST00000397102 GOLGA8FQ08AF8 430 aa15.82■□□□□ 0.12
SEC13-206ENST00000397102 GOLGA8DPQ0D2H9 430 aa15.82■□□□□ 0.12
SEC13-206ENST00000397102 CAMK2BQ13554 666 aa15.82■□□□□ 0.12
SEC13-206ENST00000397102 PAQR9Q6ZVX9 377 aa15.82■□□□□ 0.12
SEC13-206ENST00000397102 STXBP4Q6ZWJ1 553 aa15.82■□□□□ 0.12
SEC13-206ENST00000397102 SMARCD1Q96GM5 515 aa15.82■□□□□ 0.12
SEC13-206ENST00000397102 UBL7Q96S82 380 aaPredicted RBP15.82■□□□□ 0.12
SEC13-206ENST00000397102 CGRRF1Q99675 332 aa15.82■□□□□ 0.12
SEC13-206ENST00000397102 MED10Q9BTT4 135 aa15.82■□□□□ 0.12
SEC13-206ENST00000397102 TRIM9Q9C026 710 aa15.82■□□□□ 0.12
SEC13-206ENST00000397102 TMEM131Q92545 1883 aa15.82■□□□□ 0.12
SEC13-206ENST00000397102 CKAP5Q14008 2032 aa15.82■□□□□ 0.12
SEC13-206ENST00000397102 GOLGA4Q13439 2230 aaKnown RBP15.82■□□□□ 0.12
SEC13-206ENST00000397102 KCNJ18B7U540 433 aa15.81■□□□□ 0.12
SEC13-206ENST00000397102 NPC1O15118 1278 aa15.81■□□□□ 0.12
SEC13-206ENST00000397102 OXTRP30559 389 aa15.81■□□□□ 0.12
SEC13-206ENST00000397102 C19orf57Q0VDD7 668 aa15.81■□□□□ 0.12
SEC13-206ENST00000397102 CRELD1Q96HD1 420 aa15.81■□□□□ 0.12
SEC13-206ENST00000397102 HELZ2Q9BYK8 2649 aaKnown RBP15.81■□□□□ 0.12
SEC13-206ENST00000397102 MKRN2Q9H000 416 aaKnown RBP15.81■□□□□ 0.12
SEC13-206ENST00000397102 FBXO44Q9H4M3 255 aa15.81■□□□□ 0.12
SEC13-206ENST00000397102 TLR8Q9NR97 1041 aaKnown RBP15.81■□□□□ 0.12
SEC13-206ENST00000397102 NXF1Q9UBU9 619 aaKnown RBP15.81■□□□□ 0.12
SEC13-206ENST00000397102 FBXO2Q9UK22 296 aaPredicted RBP15.81■□□□□ 0.12
SEC13-206ENST00000397102 FBXO10Q9UK96 956 aa15.81■□□□□ 0.12
SEC13-206ENST00000397102 E9PAM4 449 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 IGLV3-19P01714 112 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 ATICP31939 592 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 ATP5C1P36542 298 aaKnown RBP15.8■□□□□ 0.12
SEC13-206ENST00000397102 ABCG1P45844 678 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 PGFP49763 221 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 TPMTP51580 245 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 TRPC3Q13507 836 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 ENPP2Q13822 863 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 PSMD6Q15008 389 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 SUZ12Q15022 739 aaKnown RBP15.8■□□□□ 0.12
SEC13-206ENST00000397102 SNRNP35Q16560 246 aaKnown RBP15.8■□□□□ 0.12
SEC13-206ENST00000397102 LARP1BQ659C4 914 aaKnown RBP15.8■□□□□ 0.12
SEC13-206ENST00000397102 CCDC73Q6ZRK6 1079 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 MARCH9Q86YJ5 346 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 CCDC65Q8IXS2 484 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 PDCD7Q8N8D1 485 aaKnown RBP15.8■□□□□ 0.12
SEC13-206ENST00000397102 RDH13Q8NBN7 331 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 ZMIZ2Q8NF64 920 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 C1orf216Q8TAB5 229 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 SYAP1Q96A49 352 aaPredicted RBP15.8■□□□□ 0.12
SEC13-206ENST00000397102 TMX3Q96JJ7 454 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 TNIP3Q96KP6 325 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 XYLT2Q9H1B5 865 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 CYLDQ9NQC7 956 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 KRT82Q9NSB4 513 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 THAP10Q9P2Z0 257 aaPredicted RBP15.8■□□□□ 0.12
SEC13-206ENST00000397102 EIF2B4Q9UI10 523 aaKnown RBP15.8■□□□□ 0.12
SEC13-206ENST00000397102 SLC27A6Q9Y2P4 619 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 SRPRBQ9Y5M8 271 aaKnown RBP15.8■□□□□ 0.12
SEC13-206ENST00000397102 ASXL3Q9C0F0 2248 aa15.8■□□□□ 0.12
SEC13-206ENST00000397102 A0A1B0GVT2 93 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 GOLGA8CPA6NN73 597 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 TK2O00142 265 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 TNFSF14O43557 240 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 AP1G2O75843 785 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 TBX18O95935 607 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 ACO1P21399 889 aaKnown RBP15.79■□□□□ 0.12
SEC13-206ENST00000397102 STAT6P42226 847 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 IL12RB1P42701 662 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 MYL6P60660 151 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 CYP24A1Q07973 514 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 SMAD1Q15797 465 aaKnown RBP15.79■□□□□ 0.12
SEC13-206ENST00000397102 TMPRSS6Q8IU80 811 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 FUKQ8N0W3 1084 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 PRCCQ92733 491 aaPredicted RBP15.79■□□□□ 0.12
SEC13-206ENST00000397102 CCDC127Q96BQ5 260 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 SIPA1Q96FS4 1042 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 NUP58Q9BVL2 599 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 PCED1AQ9H1Q7 454 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 SMYD3Q9H7B4 428 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 VRTNQ9H8Y1 702 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 PLK2Q9NYY3 685 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 SMC3Q9UQE7 1217 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 BTBD3Q9Y2F9 522 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 CLIC4Q9Y696 253 aa15.79■□□□□ 0.12
SEC13-206ENST00000397102 CABIN1Q9Y6J0 2220 aa15.78■□□□□ 0.12
SEC13-206ENST00000397102 FLNBO75369 2602 aaKnown RBP15.78■□□□□ 0.12
SEC13-206ENST00000397102 SYNCRIPO60506 623 aaKnown RBP15.78■□□□□ 0.12
SEC13-206ENST00000397102 HOXD13P35453 343 aa15.78■□□□□ 0.12
SEC13-206ENST00000397102 CDH8P55286 799 aa15.78■□□□□ 0.12
SEC13-206ENST00000397102 RABEP1Q15276 862 aa15.78■□□□□ 0.12
SEC13-206ENST00000397102 PTPRNQ16849 979 aa15.78■□□□□ 0.12
SEC13-206ENST00000397102 KLHDC10Q6PID8 442 aa15.78■□□□□ 0.12
SEC13-206ENST00000397102 Q6ZNB5 142 aa15.78■□□□□ 0.12
SEC13-206ENST00000397102 UCMAQ8WVF2 138 aa15.78■□□□□ 0.12
SEC13-206ENST00000397102 BHMTQ93088 406 aa15.78■□□□□ 0.12
SEC13-206ENST00000397102 CLIC6Q96NY7 704 aa15.78■□□□□ 0.12
SEC13-206ENST00000397102 SMOQ99835 787 aa15.78■□□□□ 0.12
SEC13-206ENST00000397102 CSNK1G1Q9HCP0 422 aa15.78■□□□□ 0.12
SEC13-206ENST00000397102 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.78■□□□□ 0.12
SEC13-206ENST00000397102 FAM149AA5PLN7 773 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms