RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 C1orf220Q5T0J3 134 aa14.45□□□□□ -0.1
SEC13-205ENST00000397101 SDHAF4Q5VUM1 108 aa14.45□□□□□ -0.1
SEC13-205ENST00000397101 LYSMD4Q5XG99 296 aa14.45□□□□□ -0.1
SEC13-205ENST00000397101 SV2AQ7L0J3 742 aa14.45□□□□□ -0.1
SEC13-205ENST00000397101 TRAPPC11Q7Z392 1133 aa14.45□□□□□ -0.1
SEC13-205ENST00000397101 RAB44Q7Z6P3 723 aaPredicted RBP14.45□□□□□ -0.1
SEC13-205ENST00000397101 LRRC52Q8N7C0 313 aa14.45□□□□□ -0.1
SEC13-205ENST00000397101 ARL14EPQ8N8R7 260 aaPredicted RBP14.45□□□□□ -0.1
SEC13-205ENST00000397101 IL17RCQ8NAC3 791 aa14.45□□□□□ -0.1
SEC13-205ENST00000397101 KCNV2Q8TDN2 545 aa14.45□□□□□ -0.1
SEC13-205ENST00000397101 ZNF516Q92618 1163 aa14.45□□□□□ -0.1
SEC13-205ENST00000397101 IMPG2Q9BZV3 1241 aa14.45□□□□□ -0.1
SEC13-205ENST00000397101 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.45□□□□□ -0.13e-6■■■■■ 52.1
SEC13-205ENST00000397101 GDAP2Q9NXN4 497 aa14.45□□□□□ -0.1
SEC13-205ENST00000397101 DDX43Q9NXZ2 648 aaKnown RBP14.45□□□□□ -0.1
SEC13-205ENST00000397101 MBD1Q9UIS9 605 aaPredicted RBP14.45□□□□□ -0.1
SEC13-205ENST00000397101 L1RE1Q9UN81 338 aa14.45□□□□□ -0.1
SEC13-205ENST00000397101 GPSM3Q9Y4H4 160 aa14.45□□□□□ -0.1
SEC13-205ENST00000397101 PTPRJQ12913 1337 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 TNRC6BQ9UPQ9 1833 aaKnown RBP14.44□□□□□ -0.1
SEC13-205ENST00000397101 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 SPAARA0A1B0GVQ0 90 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 C2orf78A6NCI8 922 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 GOLGA6L6A8MZA4 724 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 SLC9A3R1O14745 358 aaPredicted RBP14.44□□□□□ -0.1
SEC13-205ENST00000397101 GABRDO14764 452 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 MAP3K13O43283 966 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 HUS1O60921 280 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 HLA-DRAP01903 254 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 C4BPAP04003 597 aaKnown RBP14.44□□□□□ -0.1
SEC13-205ENST00000397101 SERPINF2P08697 491 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 TPM1P09493 284 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 PCSK1P29120 753 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 PPP3CCP48454 512 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 LHX1P48742 406 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 ATXN3P54252 364 aaPredicted RBP14.44□□□□□ -0.1
SEC13-205ENST00000397101 SEC13P55735 322 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 SLC7A9P82251 487 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 ZXDBP98169 803 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 SLC14A1Q13336 389 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 TDRD10Q5VZ19 366 aaKnown RBP14.44□□□□□ -0.1
SEC13-205ENST00000397101 FAM171BQ6P995 826 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 TMC6Q7Z403 805 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 TMEFF1Q8IYR6 380 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 ADGRG2Q8IZP9 1017 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 CCDC33Q8N5R6 958 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 TOP6BLQ8N6T0 577 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 TXNDC5Q8NBS9 432 aaKnown RBP14.44□□□□□ -0.1
SEC13-205ENST00000397101 EHBP1Q8NDI1 1231 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 STKLD1Q8NE28 680 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 FBXL13Q8NEE6 735 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 NEK11Q8NG66 645 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 MRFAP1L1Q96HT8 127 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 SPATA17Q96L03 361 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 PNKPQ96T60 521 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 INTS2Q9H0H0 1204 aaKnown RBP14.44□□□□□ -0.1
SEC13-205ENST00000397101 CAPN10Q9HC96 672 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 RAB20Q9NX57 234 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 EHD2Q9NZN4 543 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 AGAP1Q9UPQ3 857 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 CACNA1EQ15878 2313 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 PLXND1Q9Y4D7 1925 aa14.44□□□□□ -0.1
SEC13-205ENST00000397101 ITPR1Q14643 2758 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.43□□□□□ -0.1
SEC13-205ENST00000397101 SGK1O00141 431 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 LEFTY2O00292 366 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 OPHN1O60890 802 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 OLFM2O95897 454 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 APODP05090 189 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 ITGB3P05106 788 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 TNFRSF4P43489 277 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 KIR2DL1P43626 348 aaPredicted RBP14.43□□□□□ -0.1
SEC13-205ENST00000397101 CLDN10P78369 228 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 RBP5P82980 135 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 GFPT1Q06210 699 aaPredicted RBP14.43□□□□□ -0.1
SEC13-205ENST00000397101 LRMPQ12912 555 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 NCOA4Q13772 614 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 DHCR24Q15392 516 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 ZACNQ401N2 412 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 VSTM1Q6UX27 236 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 SLC36A4Q6YBV0 504 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 C4orf50Q6ZRC1 276 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 SPATA2LQ8IUW3 424 aaPredicted RBP14.43□□□□□ -0.1
SEC13-205ENST00000397101 ALLCQ8N6M5 410 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 SPC24Q8NBT2 197 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 TAS1R2Q8TE23 839 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 RLN3Q8WXF3 142 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 DNAAF2Q9NVR5 837 aaKnown RBP14.43□□□□□ -0.1
SEC13-205ENST00000397101 GTF3C4Q9UKN8 822 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 ITGA11Q9UKX5 1188 aa14.43□□□□□ -0.1
SEC13-205ENST00000397101 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.43□□□□□ -0.1
SEC13-205ENST00000397101 PI4KAP42356 2102 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 A0A1W2PQC6 194 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 GTPBP10A4D1E9 387 aaKnown RBP14.42□□□□□ -0.1
SEC13-205ENST00000397101 KAT7O95251 611 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 CYP17A1P05093 508 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 TRIM21P19474 475 aaKnown RBP14.42□□□□□ -0.1
SEC13-205ENST00000397101 SLC9A1P19634 815 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 ITPKAP23677 461 aa14.42□□□□□ -0.1
SEC13-205ENST00000397101 POLR2BP30876 1174 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms