RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ZBED8Q8IZ13 594 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 DEFB107AQ8IZN7 70 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 TTC39CQ8N584 583 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 PSMA8Q8TAA3 256 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 TMA16Q96EY4 203 aaKnown RBP8.71□□□□□ -1.02
NDE1-202ENST00000396355 PGM2Q96G03 612 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 RMND5BQ96G75 393 aaPredicted RBP8.71□□□□□ -1.02
NDE1-202ENST00000396355 PLEKHA8Q96JA3 519 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 C2orf49Q9BVC5 232 aaPredicted RBP8.71□□□□□ -1.02
NDE1-202ENST00000396355 SEPT3Q9UH03 358 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 AP4S1Q9Y587 144 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 SNX13Q9Y5W8 968 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 ATAD5Q96QE3 1844 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 ANKRD31Q8N7Z5 1873 aa8.71□□□□□ -1.02
NDE1-202ENST00000396355 CCNKO75909 580 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 PROCP04070 461 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 ASNSP08243 561 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 PABPC1P11940 636 aaKnown RBP8.7□□□□□ -1.02
NDE1-202ENST00000396355 ACTN1P12814 892 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 EIF2AK2P19525 551 aaKnown RBP8.7□□□□□ -1.02
NDE1-202ENST00000396355 SLC9A3P48764 834 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 CLK2P49760 499 aaKnown RBP8.7□□□□□ -1.02
NDE1-202ENST00000396355 KRT17Q04695 432 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 FLOT2Q14254 428 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 UNC13DQ70J99 1090 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 VASH1Q7L8A9 365 aaPredicted RBP8.7□□□□□ -1.02
NDE1-202ENST00000396355 GLYCTKQ8IVS8 523 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 CERS5Q8N5B7 392 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 POC5Q8NA72 575 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 DNAJC19Q96DA6 116 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 BTBD6Q96KE9 485 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 PRRG3Q9BZD7 231 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 MANSC1Q9H8J5 431 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 PARVGQ9HBI0 331 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 SLC8A2Q9UPR5 921 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 PDZK1P1A8MUH7 402 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 PSMD12O00232 456 aaPredicted RBP8.7□□□□□ -1.02
NDE1-202ENST00000396355 RIPK2O43353 540 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 AKAP10O43572 662 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 RHOBTB1O94844 696 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 SLC34A2O95436 690 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 SAT1P21673 171 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 SLC1A1P43005 524 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 CDK17Q00537 523 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 ZNF423Q2M1K9 1284 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 FAM214AQ32MH5 1076 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 TMEM119Q4V9L6 283 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 FAM182AQ5T1J6 154 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 EMC10Q5UCC4 262 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 SPRYD7Q5W111 196 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 RNF43Q68DV7 783 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 AADACL2Q6P093 401 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 CASC4Q6P4E1 433 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 FAM20CQ8IXL6 584 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 GAB3Q8WWW8 586 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 RAD54LQ92698 747 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 USP13Q92995 863 aaPredicted RBP8.7□□□□□ -1.02
NDE1-202ENST00000396355 FAM163AQ96GL9 167 aaPredicted RBP8.7□□□□□ -1.02
NDE1-202ENST00000396355 KLHL32Q96NJ5 620 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 NEK6Q9HC98 313 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 RIC8AQ9NPQ8 531 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 SYNPO2Q9UMS6 1093 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 MYPNQ86TC9 1320 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 NRXN2Q9P2S2 1712 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 POTEB3A0JP26 581 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 STAM2O75886 525 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 CYP1A1P04798 512 aaPredicted RBP8.7□□□□□ -1.02
NDE1-202ENST00000396355 CHRNB1P11230 501 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 POLR2EP19388 210 aaKnown RBP8.7□□□□□ -1.02
NDE1-202ENST00000396355 ALDH1A3P47895 512 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 NAB2Q15742 525 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 KCNJ8Q15842 424 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 ASTE1Q2TB18 679 aaPredicted RBP8.7□□□□□ -1.02
NDE1-202ENST00000396355 MYLK3Q32MK0 819 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 DCAF6Q58WW2 860 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 NBPF12Q5TAG4 269 aaPredicted RBP8.7□□□□□ -1.02
NDE1-202ENST00000396355 POTEBQ6S5H4 581 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 BTN2A1Q7KYR7 527 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 TTC7BQ86TV6 843 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 GRAMD2AQ8IUY3 354 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 CCDC89Q8N998 374 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 FIG4Q92562 907 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 TRIM63Q969Q1 353 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 CEP19Q96LK0 163 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 VPS35Q96QK1 796 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 CUL9Q8IWT3 2517 aa8.7□□□□□ -1.02
NDE1-202ENST00000396355 A8MV72 311 aaPredicted RBP8.69□□□□□ -1.02
NDE1-202ENST00000396355 INO80B-WBP1J3KQ70 363 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 NEMP1O14524 444 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 TLR2O60603 784 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 FKBP6O75344 327 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 IRF5Q13568 498 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 PTK2BQ14289 1009 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 ARL13BQ3SXY8 428 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 MEI1Q5TIA1 1274 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 AGAP9Q5VTM2 703 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 ZCCHC8Q6NZY4 707 aaKnown RBP8.69□□□□□ -1.02
NDE1-202ENST00000396355 CLNKQ7Z7G1 428 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 PRUNE1Q86TP1 453 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 TMPRSS6Q8IU80 811 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms