RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 RBM15BQ8NDT2 890 aaKnown RBP11.73□□□□□ -0.53
RAPGEF3-202ENST00000395358 NKX2-3Q8TAU0 364 aa11.73□□□□□ -0.53
RAPGEF3-202ENST00000395358 FAM20AQ96MK3 541 aa11.73□□□□□ -0.53
RAPGEF3-202ENST00000395358 CHID1Q9BWS9 393 aa11.73□□□□□ -0.53
RAPGEF3-202ENST00000395358 IRF2BPLQ9H1B7 796 aa11.73□□□□□ -0.53
RAPGEF3-202ENST00000395358 LRRC4CQ9HCJ2 640 aa11.73□□□□□ -0.53
RAPGEF3-202ENST00000395358 CCDC177Q9NQR7 707 aaPredicted RBP11.73□□□□□ -0.53
RAPGEF3-202ENST00000395358 SACM1LQ9NTJ5 587 aa11.73□□□□□ -0.53
RAPGEF3-202ENST00000395358 NAGPAQ9UK23 515 aa11.73□□□□□ -0.53
RAPGEF3-202ENST00000395358 USTQ9Y2C2 406 aa11.73□□□□□ -0.53
RAPGEF3-202ENST00000395358 MYH8P13535 1937 aa11.73□□□□□ -0.53
RAPGEF3-202ENST00000395358 COL2A1P02458 1487 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 SNED1Q8TER0 1413 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 DNALI1O14645 258 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 FAM13AO94988 1023 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 APOA1P02647 267 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 RPA3P35244 121 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 MGAT5Q09328 741 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 ART3Q13508 389 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 FLOT2Q14254 428 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 PDK4Q16654 411 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 PPM1LQ5SGD2 360 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 Q6ZNX1 250 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 SPERTQ8NA61 448 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 PARVGQ9HBI0 331 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 FKBP14Q9NWM8 211 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 MAP3K20Q9NYL2 800 aaKnown RBP11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 HESX1Q9UBX0 185 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 ZNF112Q9UJU3 913 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 EP400Q96L91 3159 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 PLA2G6O60733 806 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 TDP2O95551 362 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 CHRNB1P11230 501 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 CRABP2P29373 138 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 RCVRNP35243 200 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 COILP38432 576 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 CSE1LP55060 971 aaKnown RBP11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 COPZ1P61923 177 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 ATP2C1P98194 919 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 TRIM25Q14258 630 aaKnown RBP11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 NRF1Q16656 503 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 NXNQ6DKJ4 435 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 MFSD5Q6N075 450 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 CYFIP1Q7L576 1253 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 RHOT2Q8IXI1 618 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 EFCAB3Q8N7B9 438 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 DCUN1D1Q96GG9 259 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 C17orf80Q9BSJ5 609 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 ADAM7Q9H2U9 754 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 SLC38A10Q9HBR0 1119 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 AFG3L2Q9Y4W6 797 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 KANSL1LA0AUZ9 987 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 TMEM88BA6NKF7 163 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 USP12O75317 370 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 CPA3P15088 417 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 ADRA1DP25100 572 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 MAGEA4P43358 317 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 NEDD8Q15843 81 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 ZNF829Q3KNS6 432 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 BRSK2Q8IWQ3 736 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 MCRS1Q96EZ8 462 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 TSNARE1Q96NA8 513 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 MRPL9Q9BYD2 267 aaKnown RBP11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 SPATC1LQ9H0A9 340 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 MROH8Q9H579 483 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 ARAP2Q8WZ64 1704 aa11.72□□□□□ -0.53
RAPGEF3-202ENST00000395358 TTC34A8MYJ7 566 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 GOLGA8SH3BPF8 625 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 GOLGA8MH3BSY2 632 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 ZC3H11AO75152 810 aaKnown RBP eCLIP11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 KCNJ8Q15842 424 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 LDLRAP1Q5SW96 308 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 CDH24Q86UP0 819 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 DEFB107AQ8IZN7 70 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 APPL2Q8NEU8 664 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 AZIN2Q96A70 460 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 COPS7BQ9H9Q2 264 aaPredicted RBP11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 ERVK-11Q9UQG0 969 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 ASB14A6NK59 587 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 BTBD19C9JJ37 291 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 ALDH1A1P00352 501 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 ACTN1P12814 892 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 TCN1P20061 433 aaPredicted RBP11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 HOXD13P35453 343 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 CYP4A11Q02928 519 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 PGS1Q32NB8 556 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 C6orf52Q5T4I8 152 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 GALNT18Q6P9A2 607 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 ADCK1Q86TW2 530 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 PDSS2Q86YH6 399 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 ST13P5Q8NFI4 369 aaPredicted RBP11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 SCFD1Q8WVM8 642 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 MIPEPQ99797 713 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 C1orf50Q9BV19 199 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 APOL6Q9BWW8 343 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 HEMGNQ9BXL5 484 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 UCKL1Q9NWZ5 548 aa11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 HEMK1Q9Y5R4 338 aaPredicted RBP11.71□□□□□ -0.53
RAPGEF3-202ENST00000395358 ANKRD34BA5PLL1 514 aa11.71□□□□□ -0.54
RAPGEF3-202ENST00000395358 ITM2AO43736 263 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms