RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 CHST7Q9NS84 486 aa25.59■■□□□ 1.69
CTF1-202ENST00000395019 R3HDM2Q9Y2K5 976 aaKnown RBP25.59■■□□□ 1.69
CTF1-202ENST00000395019 MDM4O15151 490 aa25.59■■□□□ 1.69
CTF1-202ENST00000395019 FYNP06241 537 aa25.59■■□□□ 1.69
CTF1-202ENST00000395019 DNAJB1P25685 340 aa25.59■■□□□ 1.69
CTF1-202ENST00000395019 GRIK1P39086 918 aa25.59■■□□□ 1.69
CTF1-202ENST00000395019 SULT1E1P49888 294 aa25.59■■□□□ 1.69
CTF1-202ENST00000395019 DCAF6Q58WW2 860 aa25.59■■□□□ 1.69
CTF1-202ENST00000395019 RTP2Q5QGT7 225 aa25.59■■□□□ 1.69
CTF1-202ENST00000395019 ANKS3Q6ZW76 656 aa25.59■■□□□ 1.69
CTF1-202ENST00000395019 JAMLQ86YT9 394 aa25.59■■□□□ 1.69
CTF1-202ENST00000395019 CCDC105Q8IYK2 499 aa25.59■■□□□ 1.69
CTF1-202ENST00000395019 TMEM169Q96HH4 297 aa25.59■■□□□ 1.69
CTF1-202ENST00000395019 RAB17Q9H0T7 212 aa25.59■■□□□ 1.69
CTF1-202ENST00000395019 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.59■■□□□ 1.69
CTF1-202ENST00000395019 ABI2Q9NYB9 513 aaPredicted RBP25.59■■□□□ 1.69
CTF1-202ENST00000395019 RASAL2Q9UJF2 1139 aa25.59■■□□□ 1.69
CTF1-202ENST00000395019 UTP11Q9Y3A2 253 aaKnown RBP25.59■■□□□ 1.69
CTF1-202ENST00000395019 PCDHB5Q9Y5E4 795 aa25.59■■□□□ 1.69
CTF1-202ENST00000395019 ESYT3A0FGR9 886 aa25.58■■□□□ 1.69
CTF1-202ENST00000395019 C5orf67F2Z3F1 127 aa25.58■■□□□ 1.69
CTF1-202ENST00000395019 CSPG5O95196 566 aa25.58■■□□□ 1.69
CTF1-202ENST00000395019 LTFP02788 710 aa25.58■■□□□ 1.69
CTF1-202ENST00000395019 MAGEA11P43364 429 aa25.58■■□□□ 1.69
CTF1-202ENST00000395019 PDK2Q15119 407 aa25.58■■□□□ 1.69
CTF1-202ENST00000395019 SNRNP25Q9BV90 132 aaKnown RBP25.58■■□□□ 1.69
CTF1-202ENST00000395019 SLC28A3Q9HAS3 691 aa25.58■■□□□ 1.69
CTF1-202ENST00000395019 PATJQ8NI35 1801 aa25.57■■□□□ 1.68
CTF1-202ENST00000395019 TNFRSF10BO14763 440 aa25.57■■□□□ 1.68
CTF1-202ENST00000395019 ATP8B1O43520 1251 aa25.57■■□□□ 1.68
CTF1-202ENST00000395019 CD48P09326 243 aa25.57■■□□□ 1.68
CTF1-202ENST00000395019 PPM1AP35813 382 aa25.57■■□□□ 1.68
CTF1-202ENST00000395019 CARSP49589 748 aaKnown RBP25.57■■□□□ 1.68
CTF1-202ENST00000395019 CDH6P55285 790 aa25.57■■□□□ 1.68
CTF1-202ENST00000395019 SMARCB1Q12824 385 aa25.57■■□□□ 1.68
CTF1-202ENST00000395019 CUL1Q13616 776 aa25.57■■□□□ 1.68
CTF1-202ENST00000395019 OTUD1Q5VV17 481 aaPredicted RBP25.57■■□□□ 1.68
CTF1-202ENST00000395019 VSIG1Q86XK7 387 aa25.57■■□□□ 1.68
CTF1-202ENST00000395019 AENQ8WTP8 325 aaKnown RBP25.57■■□□□ 1.68
CTF1-202ENST00000395019 ARNTL2Q8WYA1 636 aa25.57■■□□□ 1.68
CTF1-202ENST00000395019 ATG4AQ8WYN0 398 aa25.57■■□□□ 1.68
CTF1-202ENST00000395019 C8orf48Q96LL4 319 aa25.57■■□□□ 1.68
CTF1-202ENST00000395019 ERP44Q9BS26 406 aa25.57■■□□□ 1.68
CTF1-202ENST00000395019 TRIM51Q9BSJ1 452 aa25.57■■□□□ 1.68
CTF1-202ENST00000395019 KCNJ1P48048 391 aa25.56■■□□□ 1.68
CTF1-202ENST00000395019 ERMARDQ5T6L9 678 aa25.56■■□□□ 1.68
CTF1-202ENST00000395019 SYPL2Q5VXT5 272 aa25.56■■□□□ 1.68
CTF1-202ENST00000395019 BBS12Q6ZW61 710 aa25.56■■□□□ 1.68
CTF1-202ENST00000395019 MAP7D3Q8IWC1 876 aa25.56■■□□□ 1.68
CTF1-202ENST00000395019 GSPT2Q8IYD1 628 aaKnown RBP25.56■■□□□ 1.68
CTF1-202ENST00000395019 FAM71BQ8TC56 605 aa25.56■■□□□ 1.68
CTF1-202ENST00000395019 RRN3Q9NYV6 651 aa25.56■■□□□ 1.68
CTF1-202ENST00000395019 CALCOCO1Q9P1Z2 691 aa25.56■■□□□ 1.68
CTF1-202ENST00000395019 FEZ2Q9UHY8 353 aaPredicted RBP25.56■■□□□ 1.68
CTF1-202ENST00000395019 NAALADL1Q9UQQ1 740 aa25.56■■□□□ 1.68
CTF1-202ENST00000395019 RWDD3Q9Y3V2 267 aa25.56■■□□□ 1.68
CTF1-202ENST00000395019 MYO7AQ13402 2215 aa25.56■■□□□ 1.68
CTF1-202ENST00000395019 CAPN9O14815 690 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 TRIM66O15016 1216 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 GRM6O15303 877 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 ECEL1O95672 775 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 SLC5A3P53794 718 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 ATXN1P54253 815 aaKnown RBP25.55■■□□□ 1.68
CTF1-202ENST00000395019 GPR17Q13304 367 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 SNX1Q13596 522 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 DPYSL3Q14195 570 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 TRADDQ15628 312 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 DUPD1Q68J44 220 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 DRICH1Q6PGQ1 229 aaPredicted RBP25.55■■□□□ 1.68
CTF1-202ENST00000395019 BEND5Q7L4P6 421 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 DDX53Q86TM3 631 aaKnown RBP25.55■■□□□ 1.68
CTF1-202ENST00000395019 SCN4BQ8IWT1 228 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 SPPL3Q8TCT6 385 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 AUTS2Q8WXX7 1259 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 IFT81Q8WYA0 676 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.55■■□□□ 1.68
CTF1-202ENST00000395019 RFXAPO00287 272 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 RDXP35241 583 aaKnown RBP25.55■■□□□ 1.68
CTF1-202ENST00000395019 DRG2P55039 364 aaKnown RBP25.55■■□□□ 1.68
CTF1-202ENST00000395019 KRT81Q14533 505 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 USP41Q3LFD5 358 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 RSPO2Q6UXX9 243 aaPredicted RBP25.55■■□□□ 1.68
CTF1-202ENST00000395019 VPS52Q8N1B4 723 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 FBXO22Q8NEZ5 403 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 ATL2Q8NHH9 583 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 GRK7Q8WTQ7 553 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 TRIM62Q9BVG3 475 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 CALN1Q9BXU9 219 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 FAM114A2Q9NRY5 505 aa25.55■■□□□ 1.68
CTF1-202ENST00000395019 CARNS1A5YM72 827 aa25.54■■□□□ 1.68
CTF1-202ENST00000395019 ZNF487B1APH4 448 aa25.54■■□□□ 1.68
CTF1-202ENST00000395019 M0QYT0 321 aa25.54■■□□□ 1.68
CTF1-202ENST00000395019 SOD2P04179 222 aa25.54■■□□□ 1.68
CTF1-202ENST00000395019 PITX1P78337 314 aaPredicted RBP25.54■■□□□ 1.68
CTF1-202ENST00000395019 CAMK1Q14012 370 aa25.54■■□□□ 1.68
CTF1-202ENST00000395019 ZC3H12AQ5D1E8 599 aaKnown RBP25.54■■□□□ 1.68
CTF1-202ENST00000395019 EMBQ6PCB8 327 aa25.54■■□□□ 1.68
CTF1-202ENST00000395019 PRSS55Q6UWB4 352 aaPredicted RBP25.54■■□□□ 1.68
CTF1-202ENST00000395019 SYDE1Q6ZW31 735 aaPredicted RBP25.54■■□□□ 1.68
CTF1-202ENST00000395019 PSTKQ8IV42 348 aaKnown RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms