RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 ACAT1P24752 427 aaKnown RBP14.5□□□□□ -0.09
SNCA-204ENST00000394989 CYP2F1P24903 491 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 GEMIN4P57678 1058 aaKnown RBP14.5□□□□□ -0.09
SNCA-204ENST00000394989 SNX16P57768 344 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 GBE1Q04446 702 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 RNASELQ05823 741 aaKnown RBP14.5□□□□□ -0.09
SNCA-204ENST00000394989 BIRC2Q13490 618 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 ITIH4Q14624 930 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 FAM133BQ5BKY9 247 aaKnown RBP14.5□□□□□ -0.09
SNCA-204ENST00000394989 NUGGCQ68CJ6 796 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 ARHGEF18Q6ZSZ5 1173 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 TBC1D1Q86TI0 1168 aaPredicted RBP14.5□□□□□ -0.09
SNCA-204ENST00000394989 IFNL1Q8IU54 200 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 PDIK1LQ8N165 341 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 TRABDQ9H4I3 376 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 CYLDQ9NQC7 956 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 PSMC3IPQ9P2W1 217 aaPredicted RBP14.5□□□□□ -0.09
SNCA-204ENST00000394989 GRID1Q9ULK0 1009 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 MANSC4A6NHS7 340 aaPredicted RBP14.5□□□□□ -0.09
SNCA-204ENST00000394989 ASMTLO95671 621 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 WARSP23381 471 aaKnown RBP14.5□□□□□ -0.09
SNCA-204ENST00000394989 LRPAP1P30533 357 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 FOXN2P32314 431 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 GCKP35557 465 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 SCNN1AP37088 669 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 NR1H3Q13133 447 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 CGB2Q6NT52 195 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 PIGZQ86VD9 579 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 MZB1Q8WU39 189 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 TSPAN18Q96SJ8 248 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 SAMD15Q9P1V8 674 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 GTF2IRD1Q9UHL9 959 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 CHMP2BQ9UQN3 213 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 TEX264Q9Y6I9 313 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 BCLAF3A2AJT9 711 aaKnown RBP14.49□□□□□ -0.09
SNCA-204ENST00000394989 ENO4A6NNW6 628 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 SMAPO00193 183 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 PRPF4O43172 522 aaKnown RBP eCLIP14.49□□□□□ -0.09
SNCA-204ENST00000394989 KRT15P19012 456 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 STX2P32856 288 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 ELK3P41970 407 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 PITX1P78337 314 aaPredicted RBP14.49□□□□□ -0.09
SNCA-204ENST00000394989 OTUD1Q5VV17 481 aaPredicted RBP14.49□□□□□ -0.09
SNCA-204ENST00000394989 PYROXD2Q8N2H3 581 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 CCDC33Q8N5R6 958 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 TOP6BLQ8N6T0 577 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 STAMBPL1Q96FJ0 436 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 HSFY1Q96LI6 401 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 MAGEB18Q96M61 343 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 TGS1Q96RS0 853 aaKnown RBP14.49□□□□□ -0.09
SNCA-204ENST00000394989 KCTD15Q96SI1 283 aaPredicted RBP14.49□□□□□ -0.09
SNCA-204ENST00000394989 PAFAH2Q99487 392 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 DHX35Q9H5Z1 703 aaKnown RBP14.49□□□□□ -0.09
SNCA-204ENST00000394989 RAB6BQ9NRW1 208 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 FETUBQ9UGM5 382 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 AP4E1Q9UPM8 1137 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 MFHAS1Q9Y4C4 1052 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 ZNF487B1APH4 448 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 XPO1O14980 1071 aaKnown RBP14.49□□□□□ -0.09
SNCA-204ENST00000394989 TYROBPO43914 113 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 C6orf222P0C671 652 aaPredicted RBP14.49□□□□□ -0.09
SNCA-204ENST00000394989 RPA3P35244 121 aaPredicted RBP14.49□□□□□ -0.09
SNCA-204ENST00000394989 ADIGQ0VDE8 80 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 LACTB2Q53H82 288 aaPredicted RBP14.49□□□□□ -0.09
SNCA-204ENST00000394989 FAXCQ5TGI0 409 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 WSCD1Q658N2 575 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 HNRNPABQ99729 332 aaKnown RBP14.49□□□□□ -0.09
SNCA-204ENST00000394989 NMRK2Q9NPI5 230 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 NKIRAS1Q9NYS0 192 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 USP3Q9Y6I4 520 aa14.49□□□□□ -0.09
SNCA-204ENST00000394989 CHADO15335 359 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 GNAT1P11488 350 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 SCTRP47872 440 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 CCNHP51946 323 aaPredicted RBP14.48□□□□□ -0.09
SNCA-204ENST00000394989 ADGRD1Q6QNK2 874 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 PPP1R21Q6ZMI0 780 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 DCAKDQ8WVC6 231 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 SGSM3Q96HU1 749 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 TNIP3Q96KP6 325 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 CSPG4P5Q96PW8 444 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 DUSP16Q9BY84 665 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 PPCSQ9HAB8 311 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 ETNK2Q9NVF9 386 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 CDY2AQ9Y6F7 541 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 SCN10AQ9Y5Y9 1956 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 ZNF638Q14966 1978 aaKnown RBP14.48□□□□□ -0.09
SNCA-204ENST00000394989 CCT8L1PA6NM43 557 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 GABRDO14764 452 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 TNPO2O14787 897 aaKnown RBP14.48□□□□□ -0.09
SNCA-204ENST00000394989 AKR1A1P14550 325 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 TAC1P20366 129 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 PHBP35232 272 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 ACADSBP45954 432 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 NDUFV1P49821 464 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 SATB1Q01826 763 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 ZKSCAN8Q15776 578 aaPredicted RBP14.48□□□□□ -0.09
SNCA-204ENST00000394989 PALM2Q8IXS6 379 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 DEFB106AQ8N104 65 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 ANKS4BQ8N8V4 417 aa14.48□□□□□ -0.09
SNCA-204ENST00000394989 CCDC110Q8TBZ0 833 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms