RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 SLC2A13Q96QE2 648 aa13.11□□□□□ -0.31
SSH2-203ENST00000394848 COLEC11Q9BWP8 271 aa13.11□□□□□ -0.31
SSH2-203ENST00000394848 FAM129AQ9BZQ8 928 aa13.11□□□□□ -0.31
SSH2-203ENST00000394848 PCDH18Q9HCL0 1135 aa13.11□□□□□ -0.31
SSH2-203ENST00000394848 DMAP1Q9NPF5 467 aaPredicted RBP13.11□□□□□ -0.31
SSH2-203ENST00000394848 MTRF1LQ9UGC7 380 aaKnown RBP13.11□□□□□ -0.31
SSH2-203ENST00000394848 STAP1Q9ULZ2 295 aa13.11□□□□□ -0.31
SSH2-203ENST00000394848 FAN1Q9Y2M0 1017 aa13.11□□□□□ -0.31
SSH2-203ENST00000394848 YJEFN3A6XGL0 299 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 E7ENQ6 273 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 APOC4-APOC2K7ER74 178 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 CAPN9O14815 690 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 SYN3O14994 580 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 SYF2O95926 243 aaKnown RBP13.1□□□□□ -0.31
SSH2-203ENST00000394848 APOC2P02655 101 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 ITGAVP06756 1048 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 ATF2P15336 505 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 ATP2A2P16615 1042 aaKnown RBP13.1□□□□□ -0.31
SSH2-203ENST00000394848 HSD17B3P37058 310 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 HTRA4P83105 476 aaPredicted RBP13.1□□□□□ -0.31
SSH2-203ENST00000394848 OASLQ15646 514 aaKnown RBP13.1□□□□□ -0.31
SSH2-203ENST00000394848 CA9Q16790 459 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 SYPL2Q5VXT5 272 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 HFE2Q6ZVN8 426 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 TMC3Q7Z5M5 1100 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 HERC6Q8IVU3 1022 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 DCP1BQ8IZD4 617 aaKnown RBP13.1□□□□□ -0.31
SSH2-203ENST00000394848 ALLCQ8N6M5 410 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 CCHCR1Q8TD31 782 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.1□□□□□ -0.31
SSH2-203ENST00000394848 NPY6RQ99463 290 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 CALCOCO1Q9P1Z2 691 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 ADAM28Q9UKQ2 775 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 NAALADL1Q9UQQ1 740 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 MICAL3Q7RTP6 2002 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 PDE4DIPQ5VU43 2346 aa13.1□□□□□ -0.31
SSH2-203ENST00000394848 TBKBP1A7MCY6 615 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 M0QYT0 321 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 POLR3GO15318 223 aaPredicted RBP13.09□□□□□ -0.31
SSH2-203ENST00000394848 PPFIA2O75334 1257 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 FYNP06241 537 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 KLRC2P26717 231 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 L1CAMP32004 1257 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 VPS41P49754 854 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 BCAR1P56945 870 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 MTMR3Q13615 1198 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 SLC39A12Q504Y0 691 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 ANKRD20A8PQ5CZ79 823 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 PPP6R3Q5H9R7 873 aaPredicted RBP13.09□□□□□ -0.31
SSH2-203ENST00000394848 PM20D1Q6GTS8 502 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 VSIG1Q86XK7 387 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 CEP57Q86XR8 500 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 FAM71BQ8TC56 605 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 PIK3R5Q8WYR1 880 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 ZIM3Q96PE6 472 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 RUFY1Q96T51 708 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 TMEM121Q9BTD3 319 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 MRPL9Q9BYD2 267 aaKnown RBP13.09□□□□□ -0.31
SSH2-203ENST00000394848 ZCWPW1Q9H0M4 648 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 DHX35Q9H5Z1 703 aaKnown RBP13.09□□□□□ -0.31
SSH2-203ENST00000394848 PNPLA8Q9NP80 782 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 ANAPC5Q9UJX4 755 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 ATP8A1Q9Y2Q0 1164 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 OPA1O60313 960 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 LTFP02788 710 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 OR4Q2P0C623 313 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 NCAM1P13591 858 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 CYP2F1P24903 491 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 GRIK1P39086 918 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 SLC11A1P49279 550 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 PITX1P78337 314 aaPredicted RBP13.09□□□□□ -0.31
SSH2-203ENST00000394848 CAV1Q03135 178 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 DEUP1Q05D60 604 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 DPYSL2Q16555 572 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 VARS2Q5ST30 1063 aaKnown RBP13.09□□□□□ -0.31
SSH2-203ENST00000394848 FAM171A1Q5VUB5 890 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 FAM117BQ6P1L5 589 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 BNIPLQ7Z465 357 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 PRUNE1Q86TP1 453 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 FAM131BQ86XD5 332 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 CCDC185Q8N715 623 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 BBOF1Q8ND07 529 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 UBLCP1Q8WVY7 318 aaPredicted RBP13.09□□□□□ -0.31
SSH2-203ENST00000394848 RIN2Q8WYP3 895 aaPredicted RBP13.09□□□□□ -0.31
SSH2-203ENST00000394848 IRGQQ8WZA9 623 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 P3H4Q92791 437 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 RAD9AQ99638 391 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 ZNF670Q9BS34 389 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 TXLNGYQ9BZA5 131 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 PRO3102Q9H379 93 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 AP4E1Q9UPM8 1137 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 INSL6Q9Y581 213 aa13.09□□□□□ -0.31
SSH2-203ENST00000394848 SYNJ2BP-COX16A0A087WUM0 186 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 ZNF487B1APH4 448 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 SGK1O00141 431 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 TP73O15350 636 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 GALTP07902 379 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 ZSCAN5DPP0CG00 497 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 PECAM1P16284 738 aaPredicted RBP13.08□□□□□ -0.32
SSH2-203ENST00000394848 RDXP35241 583 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms