RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 SPP2Q13103 211 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 OASLQ15646 514 aaKnown RBP22.53■■□□□ 1.2
CLDND1-202ENST00000394180 KRT39Q6A163 491 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 PPP1R2P3Q6NXS1 205 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 ZNF677Q86XU0 584 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 MYCT1Q8N699 235 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 PPP1R10Q96QC0 940 aaKnown RBP22.53■■□□□ 1.2
CLDND1-202ENST00000394180 FIZ1Q96SL8 496 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 STRA6Q9BX79 667 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 HEMGNQ9BXL5 484 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 JMJD4Q9H9V9 463 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 GNPTGQ9UJJ9 305 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 DOCK1Q14185 1865 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 ADAM23O75077 832 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 PDGFRBP09619 1106 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 CYP2J2P51589 502 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 SNAP25P60880 206 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 SNRPFP62306 86 aaKnown RBP22.53■■□□□ 1.2
CLDND1-202ENST00000394180 ZBTB17Q13105 803 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 PTK7Q13308 1070 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 MTMR2Q13614 643 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 ITGA7Q13683 1181 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 ALCAMQ13740 583 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 VGLL4Q14135 290 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 DCLRE1AQ6PJP8 1040 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 SLC47A2Q86VL8 602 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 WDR75Q8IWA0 830 aaKnown RBP22.53■■□□□ 1.2
CLDND1-202ENST00000394180 TRIML2Q8N7C3 387 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 CRYGNQ8WXF5 182 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 DLG3Q92796 817 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 RILPQ96NA2 401 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 SRPK1Q96SB4 655 aaKnown RBP22.53■■□□□ 1.2
CLDND1-202ENST00000394180 THAP1Q9NVV9 213 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 VPS28Q9UK41 221 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 B3GNT3Q9Y2A9 372 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.52■■□□□ 1.2
CLDND1-202ENST00000394180 FBXO21O94952 628 aa22.52■■□□□ 1.2
CLDND1-202ENST00000394180 IKQ13123 557 aaPredicted RBP22.52■■□□□ 1.2
CLDND1-202ENST00000394180 C1orf186Q6ZWK4 172 aa22.52■■□□□ 1.2
CLDND1-202ENST00000394180 SERAC1Q96JX3 654 aa22.52■■□□□ 1.2
CLDND1-202ENST00000394180 SMYD3Q9H7B4 428 aa22.52■■□□□ 1.2
CLDND1-202ENST00000394180 PNPLA8Q9NP80 782 aa22.52■■□□□ 1.2
CLDND1-202ENST00000394180 DNPEPQ9ULA0 475 aa22.52■■□□□ 1.2
CLDND1-202ENST00000394180 GNEQ9Y223 722 aaKnown RBP22.52■■□□□ 1.2
CLDND1-202ENST00000394180 A0A0B4J269 797 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 TRIM64CA6NLI5 447 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 GOLGA8RI6L899 631 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 UNGP13051 313 aaPredicted RBP22.51■■□□□ 1.19
CLDND1-202ENST00000394180 STAT3P40763 770 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 NFX1Q12986 1120 aaKnown RBP22.51■■□□□ 1.19
CLDND1-202ENST00000394180 TUBB3Q13509 450 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 NDUFA5Q16718 116 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 PALM2Q8IXS6 379 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 CNBD2Q96M20 576 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 SERPINI1Q99574 410 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 ZNF408Q9H9D4 720 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 TRPC7Q9HCX4 862 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 TUFT1Q9NNX1 390 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 ACP6Q9NPH0 428 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 GIN1Q9NXP7 522 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 STK39Q9UEW8 545 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 TRIM17Q9Y577 477 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 NMT1P30419 496 aaKnown RBP22.51■■□□□ 1.19
CLDND1-202ENST00000394180 SSTR1P30872 391 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 RPS3AP61247 264 aaKnown RBP22.51■■□□□ 1.19
CLDND1-202ENST00000394180 LLGL1Q15334 1064 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 LGSNQ5TDP6 509 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 LRRC38Q5VT99 294 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 TTC39BQ5VTQ0 682 aaPredicted RBP22.51■■□□□ 1.19
CLDND1-202ENST00000394180 RSPH3Q86UC2 560 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 MRRFQ96E11 262 aaKnown RBP22.51■■□□□ 1.19
CLDND1-202ENST00000394180 KREMEN1Q96MU8 473 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 RIMS3Q9UJD0 308 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 APPL1Q9UKG1 709 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 SYNPO2Q9UMS6 1093 aa22.51■■□□□ 1.19
CLDND1-202ENST00000394180 INHBAP08476 426 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 PSMC3P17980 439 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 STXBP5Q5T5C0 1151 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 SLC2A7Q6PXP3 512 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 ADAMTS16Q8TE57 1224 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 VCPIP1Q96JH7 1222 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 OLFM1Q99784 485 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 HGH1Q9BTY7 390 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 C12orf65Q9H3J6 166 aaKnown RBP22.5■■□□□ 1.19
CLDND1-202ENST00000394180 APOBEC2Q9Y235 224 aaKnown RBP22.5■■□□□ 1.19
CLDND1-202ENST00000394180 GIT1Q9Y2X7 761 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 HEY1Q9Y5J3 304 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 H6PDO95479 791 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 PTPN2P17706 415 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 CDH3P22223 829 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 TTKP33981 857 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 EPHB1P54762 984 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 EFTUD2Q15029 972 aaKnown RBP eCLIP22.5■■□□□ 1.192e-11■■■□□ 16.6
CLDND1-202ENST00000394180 MDH1BQ5I0G3 518 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 IYDQ6PHW0 289 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 CHERPQ8IWX8 916 aaKnown RBP22.5■■□□□ 1.19
CLDND1-202ENST00000394180 PPM1KQ8N3J5 372 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 NAT8LQ8N9F0 302 aa22.5■■□□□ 1.19
CLDND1-202ENST00000394180 GPATCH1Q9BRR8 931 aaKnown RBP22.5■■□□□ 1.19
CLDND1-202ENST00000394180 TDRD1Q9BXT4 1180 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms