RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 ALADP13716 330 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 KRT4P19013 534 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 TPSB2P20231 275 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 TAC1P20366 129 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 ADORA2BP29275 332 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 RGS2P41220 211 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 ELK3P41970 407 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 SKIV2L2P42285 1042 aaKnown RBP7.47□□□□□ -1.21
SMAD1-202ENST00000394092 PSMC4P43686 418 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 HDAC4P56524 1084 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 WDR4P57081 412 aaKnown RBP7.47□□□□□ -1.21
SMAD1-202ENST00000394092 YWHAGP61981 247 aaKnown RBP eCLIP7.47□□□□□ -1.21
SMAD1-202ENST00000394092 ADAM17P78536 824 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 ZNF200P98182 395 aaPredicted RBP7.47□□□□□ -1.21
SMAD1-202ENST00000394092 ADCY1Q08828 1119 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 PTK7Q13308 1070 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 MPP2Q14168 576 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 SETDB1Q15047 1291 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 TPSAB1Q15661 275 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 MSS51Q4VC12 460 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 SLC45A4Q5BKX6 768 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 PPP6R3Q5H9R7 873 aaPredicted RBP7.47□□□□□ -1.21
SMAD1-202ENST00000394092 HP1BP3Q5SSJ5 553 aaPredicted RBP7.47□□□□□ -1.21
SMAD1-202ENST00000394092 SH3PXD2AQ5TCZ1 1133 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 HEATR6Q6AI08 1181 aaKnown RBP7.47□□□□□ -1.21
SMAD1-202ENST00000394092 LIMS2Q7Z4I7 341 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 SCUBE3Q8IX30 993 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 C4orf33Q8N1A6 199 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 PQLC3Q8N755 202 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 CCDC63Q8NA47 563 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 PCDH19Q8TAB3 1148 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 DCAKDQ8WVC6 231 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 KBTBD7Q8WVZ9 684 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 DNAJB3Q8WWF6 145 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 QKIQ96PU8 341 aaKnown RBP eCLIP7.47□□□□□ -1.216e-6■■■■□ 20.5
SMAD1-202ENST00000394092 APBA2Q99767 749 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 DHX35Q9H5Z1 703 aaKnown RBP7.47□□□□□ -1.21
SMAD1-202ENST00000394092 C10orf88Q9H8K7 445 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 USP29Q9HBJ7 922 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 XAB2Q9HCS7 855 aaKnown RBP7.47□□□□□ -1.21
SMAD1-202ENST00000394092 KLC4Q9NSK0 619 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 ETNK2Q9NVF9 386 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 GTF2IRD1Q9UHL9 959 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 HES2Q9Y543 173 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 TEX264Q9Y6I9 313 aa7.47□□□□□ -1.21
SMAD1-202ENST00000394092 TSC2P49815 1807 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 TCRBV7S3A2A0A539 114 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 KBTBD13C9JR72 458 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 H3BRJ5 948 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 BANF1O75531 89 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 GCATO75600 419 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 KRT37O76014 449 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 CELF2O95319 508 aaKnown RBP7.46□□□□□ -1.22
SMAD1-202ENST00000394092 ITGBL1O95965 494 aaPredicted RBP7.46□□□□□ -1.22
SMAD1-202ENST00000394092 ZNF865P0CJ78 1059 aaPredicted RBP7.46□□□□□ -1.22
SMAD1-202ENST00000394092 TROVE2P10155 538 aaKnown RBP eCLIP7.46□□□□□ -1.22
SMAD1-202ENST00000394092 LCP1P13796 627 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 CCDC130P13994 396 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 IL4RP24394 825 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 AKAP5P24588 427 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 RBL1P28749 1068 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 LRPAP1P30533 357 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 HNRNPH1P31943 449 aaKnown RBP7.46□□□□□ -1.22
SMAD1-202ENST00000394092 L1CAMP32004 1257 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 RPA3P35244 121 aaPredicted RBP7.46□□□□□ -1.22
SMAD1-202ENST00000394092 FDFT1P37268 417 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 MATKP42679 507 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 AIF1P55008 147 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 YWHAZP63104 245 aaKnown RBP7.46□□□□□ -1.22
SMAD1-202ENST00000394092 CDK16Q00536 496 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 GAD2Q05329 585 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 SNCBQ16143 134 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 GPR162Q16538 588 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 SLC25A52Q3SY17 297 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 TWF2Q6IBS0 349 aaKnown RBP7.46□□□□□ -1.22
SMAD1-202ENST00000394092 CYB5D1Q6P9G0 228 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 LVRNQ6Q4G3 990 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 RSPH3Q86UC2 560 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 SLC26A11Q86WA9 606 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 FUKQ8N0W3 1084 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 B3GALNT2Q8NCR0 500 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 ZNF398Q8TD17 642 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 SLC2A14Q8TDB8 520 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 SLC44A1Q8WWI5 657 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 MRRFQ96E11 262 aaKnown RBP7.46□□□□□ -1.22
SMAD1-202ENST00000394092 APOPT1Q96IL0 206 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 HNRNPABQ99729 332 aaKnown RBP7.46□□□□□ -1.22
SMAD1-202ENST00000394092 C11orf84Q9BUA3 381 aaPredicted RBP7.46□□□□□ -1.22
SMAD1-202ENST00000394092 DUSP16Q9BY84 665 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 IQCGQ9H095 443 aaKnown RBP7.46□□□□□ -1.22
SMAD1-202ENST00000394092 DPEP3Q9H4B8 488 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 CDHR5Q9HBB8 845 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 TXLNGQ9NUQ3 528 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 ABCF3Q9NUQ8 709 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 GPATCH2LQ9NWQ4 482 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.46□□□□□ -1.22
SMAD1-202ENST00000394092 PRKAG3Q9UGI9 489 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 ZNF180Q9UJW8 692 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 PHTF1Q9UMS5 762 aa7.46□□□□□ -1.22
SMAD1-202ENST00000394092 IPPQ9Y573 584 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms