RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 C1orf210Q8IVY1 113 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 SCUBE3Q8IX30 993 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 ADGRG2Q8IZP9 1017 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 WDTC1Q8N5D0 677 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 NAT16Q8N8M0 369 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 C1orf131Q8NDD1 294 aaKnown RBP8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 KCTD13Q8WZ19 329 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 BHMTQ93088 406 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 FAM122AQ96E09 287 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 PIWIL1Q96J94 861 aaKnown RBP8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 NELL2Q99435 816 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 P2RY13Q9BPV8 354 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 NAA15Q9BXJ9 866 aaKnown RBP8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 OSBPL6Q9BZF3 934 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 GANQ9H2C0 597 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 ZDHHC4Q9NPG8 344 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 NLRC4Q9NPP4 1024 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 CLIC5Q9NZA1 410 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 MARCH2Q9P0N8 246 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 LIMA1Q9UHB6 759 aaKnown RBP8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 SFMBT1Q9UHJ3 866 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 R4GN57 208 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 HELZP42694 1942 aaKnown RBP8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 ZNF638Q14966 1978 aaKnown RBP8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 LGALS16A8MUM7 142 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 F8VZ95 297 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 TRDMT1O14717 391 aaKnown RBP8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 TRIM24O15164 1050 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 NCAM2O15394 837 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 TEX33O43247 280 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 PAPSS1O43252 624 aaPredicted RBP8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 LAMTOR5O43504 91 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 MED7O43513 233 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 RNF40O75150 1001 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 STC2O76061 302 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 GFPT2O94808 682 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 KLKB1P03952 638 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 ADH5P11766 374 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 RPS9P46781 194 aaKnown RBP8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 ZNF165P49910 485 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 MLLT6P55198 1093 aaPredicted RBP8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 SEC13P55735 322 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 POLR2FP61218 127 aaKnown RBP8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 UBXN1Q04323 297 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 CSTF1Q05048 431 aaKnown RBP8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 DMWDQ09019 674 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 PDAP1Q13442 181 aaKnown RBP8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 LRRC32Q14392 662 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 TAF5Q15542 800 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 ANO4Q32M45 955 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 ZSCAN23Q3MJ62 389 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 TMEM196Q5HYL7 178 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 FKBP15Q5T1M5 1219 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 TPGS1Q6ZTW0 290 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 NOP9Q86U38 636 aaKnown RBP8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 TMEM25Q86YD3 366 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 DENND1CQ8IV53 801 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 FMNL3Q8IVF7 1028 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 FAM71AQ8IYT1 594 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 ARHGAP18Q8N392 663 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 ADAM32Q8TC27 787 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 SLC20A1Q8WUM9 679 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 CD101Q93033 1021 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 MSANTD3Q96H12 275 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 FAM81BQ96LP2 452 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 PCMTD1Q96MG8 357 aaPredicted RBP8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 CPXM1Q96SM3 734 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 PRRX2Q99811 253 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 NAT10Q9H0A0 1025 aaKnown RBP8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 KCNH6Q9H252 994 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 CHRDQ9H2X0 955 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 CNGB3Q9NQW8 809 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 SIK3Q9Y2K2 1263 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 MUC6Q6W4X9 2439 aa8.03□□□□□ -1.12
HMGB3P1-201ENST00000393368 NEDD8-MDP1E9PL57 170 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 SLC9A3R1O14745 358 aaPredicted RBP8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 GRAP2O75791 330 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 ADH1CP00326 375 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 LTFP02788 710 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 ERBB2P04626 1255 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 FYNP06241 537 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 TPM2P07951 284 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 SP9P0CG40 484 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 CYP11B1P15538 503 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 CORO1AP31146 461 aaKnown RBP8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 PITX1P78337 314 aaPredicted RBP8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 PTK2Q05397 1052 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 GOLGA8FQ08AF8 430 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 GOLGA8DPQ0D2H9 430 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 GRSF1Q12849 480 aaKnown RBP eCLIP8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 NR1H3Q13133 447 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 IQCB1Q15051 598 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 C2CD6Q53TS8 623 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 KLHDC10Q6PID8 442 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 Q6ZNB5 142 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 FAM183BPQ6ZVS7 135 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 HTR3DQ70Z44 454 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 TADA2BQ86TJ2 420 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 LUZP1Q86V48 1076 aa8.02□□□□□ -1.13
HMGB3P1-201ENST00000393368 ANKRD20A12PQ8NF67 263 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms