RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 CCR10P46092 362 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 PRAMEP78395 509 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 CYP27A1Q02318 531 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 RAPSNQ13702 412 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 EPHA7Q15375 998 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 ALG11Q2TAA5 492 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 RNFT1Q5M7Z0 435 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 WDR93Q6P2C0 686 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 HHIPL2Q6UWX4 724 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 GAREM2Q75VX8 874 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 CACNA2D4Q7Z3S7 1137 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 LURAP1LQ8IV03 231 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 SYNE4Q8N205 404 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 ARRDC4Q8NCT1 418 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 SPPL3Q8TCT6 385 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 AGR3Q8TD06 166 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 COPS5Q92905 334 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 HS6ST2Q96MM7 605 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 USP44Q9H0E7 712 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 SYNDIG1Q9H7V2 258 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 MAGEE1Q9HCI5 957 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 TMOD2Q9NZR1 351 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 HMG20BQ9P0W2 317 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 NSFL1CQ9UNZ2 370 aaKnown RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 ZNF213O14771 459 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 HNRNPLP14866 589 aaKnown RBP eCLIP3.73□□□□□ -1.81
XRN1-202ENST00000392981 PSMA5P28066 241 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 PRKAR1BP31321 381 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 SLC15A1P46059 708 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 CPT1AP50416 773 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 MLLT6P55198 1093 aaPredicted RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 TMEM115Q12893 351 aaPredicted RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 TAF7Q15545 349 aaPredicted RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 WDR72Q3MJ13 1102 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 PLA1AQ53H76 456 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 INTS8Q75QN2 995 aaKnown RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 BRINP3Q76B58 766 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 IQCHQ86VS3 1027 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 NKAIN3Q8N8D7 197 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 CCNYQ8ND76 341 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 KLHL15Q96M94 604 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 MMP19Q99542 508 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 RNF208Q9H0X6 261 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 LANCL2Q9NS86 450 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 LIN7CQ9NUP9 197 aaKnown RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 CRIM1Q9NZV1 1036 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 HEY2Q9UBP5 337 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 FTSJ1Q9UET6 329 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 CDC42EP3Q9UKI2 254 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 GJD2Q9UKL4 321 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 STK38LQ9Y2H1 464 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 SIT1Q9Y3P8 196 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 CCDC169A6NNP5 214 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 M0R082 166 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 AP3B1O00203 1094 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 GRM6O15303 877 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 ZNF865P0CJ78 1059 aaPredicted RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 CPA3P15088 417 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 NPPBP16860 134 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 GNAT2P19087 354 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 KELP23276 732 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 ACVR2AP27037 513 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 ANTXR2P58335 489 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 ZNF484Q5JVG2 852 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 HLA-DQA1Q5Y7H0 255 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 MIER3Q7Z3K6 550 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 KCTD20Q7Z5Y7 419 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 TRMT2AQ8IZ69 625 aaKnown RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 REPS2Q8NFH8 660 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 GPR156Q8NFN8 814 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 OR5M3Q8NGP4 307 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 ZNF417Q8TAU3 575 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 SH3RF3Q8TEJ3 882 aaPredicted RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 NSUN4Q96CB9 384 aaKnown RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 PGAP3Q96FM1 320 aaPredicted RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 ZNF587Q96SQ5 575 aaPredicted RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 SIKE1Q9BRV8 207 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 TRIM54Q9BYV2 358 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 OSBPL6Q9BZF3 934 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 RPRD1BQ9NQG5 326 aaKnown RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 UTP6Q9NYH9 597 aaKnown RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 TRPC5Q9UL62 973 aaPredicted RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 GOLGA6L10A0A0M3HER8 536 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 CLRN2A0PK11 232 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 FRMD3A2A2Y4 597 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 HGSO14964 777 aaPredicted RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 SERPINC1P01008 464 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 ADH6P28332 368 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 KCNMA1Q12791 1236 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 ACVR2BQ13705 512 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 ADIPOQQ15848 244 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 C5orf22Q49AR2 442 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 CATSPEREQ5SY80 951 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 AP1ARQ63HQ0 302 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 ARHGEF18Q6ZSZ5 1173 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 ZNF771Q7L3S4 317 aaPredicted RBP3.72□□□□□ -1.81
XRN1-202ENST00000392981 MB21D1Q8N884 522 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 RNF152Q8N8N0 203 aa3.72□□□□□ -1.81
XRN1-202ENST00000392981 ANKS4BQ8N8V4 417 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms