RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 NCF1CA8MVU1 366 aaPredicted RBP13.49□□□□□ -0.25
LCA5-202ENST00000392959 LZTS3O60299 673 aaPredicted RBP13.49□□□□□ -0.25
LCA5-202ENST00000392959 NCF1P14598 390 aaPredicted RBP13.49□□□□□ -0.25
LCA5-202ENST00000392959 ADRA1DP25100 572 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 RGS2P41220 211 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 ZNF268Q14587 947 aaPredicted RBP13.49□□□□□ -0.25
LCA5-202ENST00000392959 FAM9CQ8IZT9 166 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 KAT2BQ92831 832 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 MYLK2Q9H1R3 596 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 CHST7Q9NS84 486 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 ARMCX1Q9P291 453 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.49□□□□□ -0.25
LCA5-202ENST00000392959 FBXO21O94952 628 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 DLGAP3O95886 979 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 GSNP06396 782 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 ATP6V1B2P21281 511 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 PRKCIP41743 596 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 SLC11A2P49281 568 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 ZNF177Q13360 481 aaPredicted RBP13.49□□□□□ -0.25
LCA5-202ENST00000392959 CYP51A1Q16850 503 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 TAF2Q6P1X5 1199 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 POU5F2Q8N7G0 328 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 L3MBTL3Q96JM7 780 aaPredicted RBP13.49□□□□□ -0.25
LCA5-202ENST00000392959 TMEM79Q9BSE2 394 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 FICDQ9BVA6 458 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 MAGEB16A2A368 324 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 CYB561D2O14569 222 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 RPS12P25398 132 aaKnown RBP13.49□□□□□ -0.25
LCA5-202ENST00000392959 SOX10P56693 466 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 PPATQ06203 517 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 HIST2H2ACQ16777 129 aaPredicted RBP13.49□□□□□ -0.25
LCA5-202ENST00000392959 TBCELQ5QJ74 424 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 HIST2H2AA3Q6FI13 130 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 TRAF7Q6Q0C0 670 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 LRRC74BQ6ZQY2 392 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 KCNK18Q7Z418 384 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 UBP1Q9NZI7 540 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 CAB39Q9Y376 341 aaPredicted RBP13.49□□□□□ -0.25
LCA5-202ENST00000392959 FAM86B1E9PN63 330 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 DDHD2O94830 711 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 FAM86B2P0C5J1 330 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 FASP25445 335 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 MZF1P28698 734 aaPredicted RBP13.49□□□□□ -0.25
LCA5-202ENST00000392959 EN1Q05925 392 aaPredicted RBP13.49□□□□□ -0.25
LCA5-202ENST00000392959 OTOP1Q7RTM1 612 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 YTHDF3Q7Z739 585 aaKnown RBP13.49□□□□□ -0.25
LCA5-202ENST00000392959 SPIRE2Q8WWL2 714 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 PRCCQ92733 491 aaPredicted RBP13.49□□□□□ -0.25
LCA5-202ENST00000392959 TADA1Q96BN2 335 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 SH3GL1Q99961 368 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 RMND5AQ9H871 391 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 CTNNAL1Q9UBT7 734 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 RAD54BQ9Y620 910 aa13.49□□□□□ -0.25
LCA5-202ENST00000392959 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.49□□□□□ -0.25
LCA5-202ENST00000392959 CHD1O14646 1710 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 CYTH3O43739 400 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 SNX3O60493 162 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 BAIAP3O94812 1187 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 CXCL8P10145 99 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 IMPDH2P12268 514 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 BMP6P22004 513 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 HPCAP84074 193 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 CCDC15Q0P6D6 951 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 TDRD10Q5VZ19 366 aaKnown RBP13.48□□□□□ -0.25
LCA5-202ENST00000392959 PLEKHA7Q6IQ23 1121 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 ADGRF2Q8IZF7 708 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 CENPLQ8N0S6 344 aaPredicted RBP13.48□□□□□ -0.25
LCA5-202ENST00000392959 TERB1Q8NA31 727 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 GLMNQ92990 594 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 EPS8L2Q9H6S3 715 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 NRDE2Q9H7Z3 1164 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 PXMP2Q9NR77 195 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 INTS13Q9NVM9 706 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 USE1Q9NZ43 259 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 COPG1Q9Y678 874 aaKnown RBP13.48□□□□□ -0.25
LCA5-202ENST00000392959 FRMPD4Q14CM0 1322 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 TPBGLP0DKB5 382 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 SLC26A2P50443 739 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 BST2Q10589 180 aaKnown RBP13.48□□□□□ -0.25
LCA5-202ENST00000392959 WASHC5Q12768 1159 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 CCDC153Q494R4 210 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 ACBD5Q5T8D3 534 aaPredicted RBP13.48□□□□□ -0.25
LCA5-202ENST00000392959 SLC22A9Q8IVM8 553 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 ZKSCAN4Q969J2 545 aaPredicted RBP13.48□□□□□ -0.25
LCA5-202ENST00000392959 CATSPER2Q96P56 530 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 HPS4Q9NQG7 708 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 CLCA2Q9UQC9 943 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 KRT87PA6NCN2 255 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 RASSF9O75901 435 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 MPOP05164 745 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 BACE1P56817 501 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 ELF3P78545 371 aaPredicted RBP13.48□□□□□ -0.25
LCA5-202ENST00000392959 FAAP100Q0VG06 881 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 TCHHL1Q5QJ38 904 aaPredicted RBP13.48□□□□□ -0.25
LCA5-202ENST00000392959 ERMARDQ5T6L9 678 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 HOMEZQ8IX15 550 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 ANKRD13AQ8IZ07 590 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 ZCCHC9Q8N567 271 aaKnown RBP13.48□□□□□ -0.25
LCA5-202ENST00000392959 GDPD5Q8WTR4 605 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 CENPTQ96BT3 561 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms