RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 SHOC2Q9UQ13 582 aa15.04■□□□□ -0
PSME4-201ENST00000389993 B2RBV5 119 aa15.03■□□□□ -0
PSME4-201ENST00000389993 STX7O15400 261 aaKnown RBP15.03■□□□□ -0
PSME4-201ENST00000389993 GTF2BQ00403 316 aa15.03■□□□□ -0
PSME4-201ENST00000389993 MAMLD1Q13495 774 aa15.03■□□□□ -0
PSME4-201ENST00000389993 BFSP2Q13515 415 aa15.03■□□□□ -0
PSME4-201ENST00000389993 VIPAS39Q9H9C1 493 aa15.03■□□□□ -0
PSME4-201ENST00000389993 ST3GAL5Q9UNP4 418 aa15.03■□□□□ -0
PSME4-201ENST00000389993 ERI2A8K979 691 aaKnown RBP15.03■□□□□ -0
PSME4-201ENST00000389993 RHOCP08134 193 aa15.03■□□□□ -0
PSME4-201ENST00000389993 AGBL2Q5U5Z8 902 aa15.03■□□□□ -0
PSME4-201ENST00000389993 FKBP1CQ5VVH2 108 aa15.03■□□□□ -0
PSME4-201ENST00000389993 FOXR1Q6PIV2 292 aa15.03■□□□□ -0
PSME4-201ENST00000389993 TRIM54Q9BYV2 358 aa15.03■□□□□ -0
PSME4-201ENST00000389993 SMG5Q9UPR3 1016 aaKnown RBP15.03■□□□□ -0
PSME4-201ENST00000389993 FOXO6A8MYZ6 492 aa15.03■□□□□ -0
PSME4-201ENST00000389993 IGF2BP3O00425 579 aaKnown RBP eCLIP15.03■□□□□ -0
PSME4-201ENST00000389993 TREHO43280 583 aa15.03■□□□□ -0
PSME4-201ENST00000389993 H2AFXP16104 143 aaPredicted RBP15.03■□□□□ -0
PSME4-201ENST00000389993 YBX3P16989 372 aaKnown RBP eCLIP15.03■□□□□ -04e-9■■□□□ 12.5
PSME4-201ENST00000389993 PLK1P53350 603 aa15.03■□□□□ -0
PSME4-201ENST00000389993 NBPF20Q3BBV1 942 aa15.03■□□□□ -0
PSME4-201ENST00000389993 RBM23Q86U06 439 aaKnown RBP15.03■□□□□ -0
PSME4-201ENST00000389993 BAP1Q92560 729 aa15.03■□□□□ -0
PSME4-201ENST00000389993 WWP1Q9H0M0 922 aa15.03■□□□□ -0
PSME4-201ENST00000389993 NAPEPLDQ6IQ20 393 aa15.03■□□□□ -0
PSME4-201ENST00000389993 LGI2Q8N0V4 545 aa15.03■□□□□ -0
PSME4-201ENST00000389993 ZFP42Q96MM3 310 aa15.03■□□□□ -0
PSME4-201ENST00000389993 NOP53Q9NZM5 478 aaKnown RBP15.03■□□□□ -0
PSME4-201ENST00000389993 NAALADL1Q9UQQ1 740 aa15.03■□□□□ -0
PSME4-201ENST00000389993 TBC1D12O60347 775 aa15.03■□□□□ -0
PSME4-201ENST00000389993 MAFO75444 373 aaPredicted RBP15.03■□□□□ -0
PSME4-201ENST00000389993 OXCT1P55809 520 aa15.03■□□□□ -0
PSME4-201ENST00000389993 MOXD2PA6NHM9 499 aa15.02■□□□□ -0
PSME4-201ENST00000389993 FGRP09769 529 aa15.02■□□□□ -0
PSME4-201ENST00000389993 FLT3LGP49771 235 aa15.02■□□□□ -0
PSME4-201ENST00000389993 FMO1Q01740 532 aa15.02■□□□□ -0
PSME4-201ENST00000389993 HSP90AA5PQ58FG0 334 aa15.02■□□□□ -0
PSME4-201ENST00000389993 IQSEC1Q6DN90 963 aa15.02■□□□□ -0
PSME4-201ENST00000389993 IRF2BP1Q8IU81 584 aa15.02■□□□□ -0
PSME4-201ENST00000389993 KCTD17Q8N5Z5 321 aa15.02■□□□□ -0
PSME4-201ENST00000389993 TRIM4Q9C037 500 aa15.02■□□□□ -0
PSME4-201ENST00000389993 ACSS2Q9NR19 701 aa15.02■□□□□ -0
PSME4-201ENST00000389993 KIF17Q9P2E2 1029 aa15.02■□□□□ -0
PSME4-201ENST00000389993 SCOCQ9UIL1 159 aa15.02■□□□□ -0
PSME4-201ENST00000389993 L1RE1Q9UN81 338 aa15.02■□□□□ -0
PSME4-201ENST00000389993 ANGPT2O15123 496 aa15.02■□□□□ -0
PSME4-201ENST00000389993 TPST1O60507 370 aa15.02■□□□□ -0
PSME4-201ENST00000389993 HSPA8P11142 646 aaKnown RBP15.02■□□□□ -0
PSME4-201ENST00000389993 PTENP60484 403 aa15.02■□□□□ -0
PSME4-201ENST00000389993 PPP1R26Q5T8A7 1209 aaPredicted RBP15.02■□□□□ -0
PSME4-201ENST00000389993 C16orf46Q6P387 395 aa15.02■□□□□ -0
PSME4-201ENST00000389993 TRIML2Q8N7C3 387 aa15.02■□□□□ -0
PSME4-201ENST00000389993 HEY2Q9UBP5 337 aa15.02■□□□□ -0
PSME4-201ENST00000389993 BAZ2AQ9UIF9 1905 aaKnown RBP15.02■□□□□ -0
PSME4-201ENST00000389993 KLRG2A4D1S0 409 aaPredicted RBP15.02■□□□□ -0
PSME4-201ENST00000389993 AVILO75366 819 aa15.02■□□□□ -0
PSME4-201ENST00000389993 HIST1H2AGP0C0S8 130 aaPredicted RBP15.02■□□□□ -0
PSME4-201ENST00000389993 PIRTP0C851 137 aa15.02■□□□□ -0
PSME4-201ENST00000389993 HIST1H2ADP20671 130 aa15.02■□□□□ -0
PSME4-201ENST00000389993 NFKBIAP25963 317 aa15.02■□□□□ -0
PSME4-201ENST00000389993 TBX4P57082 545 aa15.02■□□□□ -0
PSME4-201ENST00000389993 HIC1Q14526 733 aa15.02■□□□□ -0
PSME4-201ENST00000389993 KCNT2Q6UVM3 1135 aa15.02■□□□□ -0
PSME4-201ENST00000389993 HIST1H2AHQ96KK5 128 aa15.02■□□□□ -0
PSME4-201ENST00000389993 HIST1H2AJQ99878 128 aa15.02■□□□□ -0
PSME4-201ENST00000389993 H2AFJQ9BTM1 129 aa15.02■□□□□ -0
PSME4-201ENST00000389993 OSBPL1AQ9BXW6 950 aa15.02■□□□□ -0
PSME4-201ENST00000389993 LMO7Q8WWI1 1683 aa15.02■□□□□ -0
PSME4-201ENST00000389993 E9PBE3 544 aa15.02□□□□□ -0.01
PSME4-201ENST00000389993 KLHL41O60662 606 aa15.02□□□□□ -0.01
PSME4-201ENST00000389993 RABGAP1LQ5R372 815 aa15.02□□□□□ -0.01
PSME4-201ENST00000389993 ZNF280DQ6N043 979 aa15.02□□□□□ -0.01
PSME4-201ENST00000389993 SPATA6LQ8N4H0 392 aa15.02□□□□□ -0.01
PSME4-201ENST00000389993 CDYLQ9Y232 598 aa15.02□□□□□ -0.01
PSME4-201ENST00000389993 PCDHA3Q9Y5H8 950 aa15.02□□□□□ -0.01
PSME4-201ENST00000389993 COL1A1P02452 1464 aaPredicted RBP15.02□□□□□ -0.01
PSME4-201ENST00000389993 SDR42E2A6NKP2 422 aa15.02□□□□□ -0.01
PSME4-201ENST00000389993 KATNA1O75449 491 aa15.02□□□□□ -0.01
PSME4-201ENST00000389993 CAPN15O75808 1086 aa15.02□□□□□ -0.01
PSME4-201ENST00000389993 ARF4P18085 180 aaPredicted RBP15.02□□□□□ -0.01
PSME4-201ENST00000389993 TAS2R40P59535 323 aa15.02□□□□□ -0.01
PSME4-201ENST00000389993 YWHAZP63104 245 aaKnown RBP15.02□□□□□ -0.01
PSME4-201ENST00000389993 TRPM5Q9NZQ8 1165 aa15.02□□□□□ -0.01
PSME4-201ENST00000389993 RNF112Q9ULX5 631 aa15.02□□□□□ -0.01
PSME4-201ENST00000389993 GTPBP10A4D1E9 387 aaKnown RBP15.01□□□□□ -0.01
PSME4-201ENST00000389993 MEI4A8MW99 385 aa15.01□□□□□ -0.01
PSME4-201ENST00000389993 ZSCAN9O15535 394 aaPredicted RBP15.01□□□□□ -0.01
PSME4-201ENST00000389993 RIPK2O43353 540 aa15.01□□□□□ -0.01
PSME4-201ENST00000389993 ERVK-10P10266 1014 aa15.01□□□□□ -0.01
PSME4-201ENST00000389993 SKIP12755 728 aa15.01□□□□□ -0.01
PSME4-201ENST00000389993 MAPRE1Q15691 268 aaKnown RBP15.01□□□□□ -0.01
PSME4-201ENST00000389993 EXOC2Q96KP1 924 aa15.01□□□□□ -0.01
PSME4-201ENST00000389993 APBA2Q99767 749 aa15.01□□□□□ -0.01
PSME4-201ENST00000389993 SLC7A5P2Q9GIP4 190 aa15.01□□□□□ -0.01
PSME4-201ENST00000389993 SFMBT1Q9UHJ3 866 aa15.01□□□□□ -0.01
PSME4-201ENST00000389993 PTPN1P18031 435 aaKnown RBP15.01□□□□□ -0.01
PSME4-201ENST00000389993 C1QBPQ07021 282 aaKnown RBP15.01□□□□□ -0.01
PSME4-201ENST00000389993 SMAD5Q99717 465 aaKnown RBP15.01□□□□□ -0.01
PSME4-201ENST00000389993 CRYL1Q9Y2S2 319 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms