RNA–Protein interactions for RNA: ENST00000389858.4

LGR4-202, Transcript of leucine rich repeat containing G protein-coupled receptor 4, humanhuman

TSL 1 (best) BASIC

Gene LGR4, Length 5,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR4-202ENST00000389858 H2AFY2Q9P0M6 372 aaPredicted RBP21.33■■□□□ 1
LGR4-202ENST00000389858 THRAP10827 490 aa21.32■■□□□ 1
LGR4-202ENST00000389858 ST3GAL1Q11201 340 aa21.32■■□□□ 1
LGR4-202ENST00000389858 SFSWAPQ12872 951 aaKnown RBP21.32■■□□□ 1
LGR4-202ENST00000389858 DEFB128Q7Z7B8 93 aa21.32■■□□□ 1
LGR4-202ENST00000389858 CYP4F12Q9HCS2 524 aa21.32■■□□□ 1
LGR4-202ENST00000389858 PIK3CDO00329 1044 aa21.32■■□□□ 1
LGR4-202ENST00000389858 GHRP10912 638 aa21.32■■□□□ 1
LGR4-202ENST00000389858 MARC1Q5VT66 337 aa21.32■■□□□ 1
LGR4-202ENST00000389858 ILDR2Q71H61 639 aa21.32■■□□□ 1
LGR4-202ENST00000389858 MYCBPAPQ8TBZ2 947 aa21.32■■□□□ 1
LGR4-202ENST00000389858 GPAMQ9HCL2 828 aa21.32■■□□□ 1
LGR4-202ENST00000389858 UBP1Q9NZI7 540 aa21.32■■□□□ 1
LGR4-202ENST00000389858 VANGL2Q9ULK5 521 aa21.32■■□□□ 1
LGR4-202ENST00000389858 SHOC2Q9UQ13 582 aa21.32■■□□□ 1
LGR4-202ENST00000389858 ATP11BQ9Y2G3 1177 aa21.32■■□□□ 1
LGR4-202ENST00000389858 GOLGA8TH3BQL2 631 aa21.32■■□□□ 1
LGR4-202ENST00000389858 RNASEH1O60930 286 aaKnown RBP21.32■■□□□ 1
LGR4-202ENST00000389858 KCNA3P22001 575 aa21.32■■□□□ 1
LGR4-202ENST00000389858 PRIM2P49643 509 aa21.32■■□□□ 1
LGR4-202ENST00000389858 VGLL2Q8N8G2 317 aa21.32■■□□□ 1
LGR4-202ENST00000389858 FAM136AQ96C01 138 aa21.32■■□□□ 1
LGR4-202ENST00000389858 A0A087X0B3 334 aa21.32■■□□□ 1
LGR4-202ENST00000389858 LACTBL1A8MY62 500 aa21.32■■□□□ 1
LGR4-202ENST00000389858 PAEPP09466 180 aa21.32■■□□□ 1
LGR4-202ENST00000389858 WLSQ5T9L3 541 aa21.32■■□□□ 1
LGR4-202ENST00000389858 ITIH5Q86UX2 942 aa21.32■■□□□ 1
LGR4-202ENST00000389858 DCLK3Q9C098 648 aa21.32■■□□□ 1
LGR4-202ENST00000389858 SOX13Q9UN79 622 aa21.32■■□□□ 1
LGR4-202ENST00000389858 COL3A1P02461 1466 aaPredicted RBP21.32■■□□□ 1
LGR4-202ENST00000389858 SCNN1BP51168 640 aa21.31■■□□□ 1
LGR4-202ENST00000389858 SEL1L3Q68CR1 1132 aa21.31■■□□□ 1
LGR4-202ENST00000389858 TBKBP1A7MCY6 615 aa21.31■■□□□ 1
LGR4-202ENST00000389858 F8W810 466 aa21.31■■□□□ 1
LGR4-202ENST00000389858 SLC12A3P55017 1021 aa21.31■■□□□ 1
LGR4-202ENST00000389858 SMARCD1Q96GM5 515 aa21.31■■□□□ 1
LGR4-202ENST00000389858 EFCAB1Q9HAE3 211 aa21.31■■□□□ 1
LGR4-202ENST00000389858 PNMA8BQ9ULN7 279 aaPredicted RBP21.31■■□□□ 1
LGR4-202ENST00000389858 PCDHB12Q9Y5F1 795 aa21.31■■□□□ 1
LGR4-202ENST00000389858 ALDH1A2O94788 518 aa21.31■■□□□ 1
LGR4-202ENST00000389858 MICAL2O94851 1124 aa21.31■■□□□ 1
LGR4-202ENST00000389858 GLI1P08151 1106 aa21.31■■□□□ 1
LGR4-202ENST00000389858 DNAJB2P25686 324 aa21.31■■□□□ 1
LGR4-202ENST00000389858 SOCS4Q8WXH5 440 aa21.31■■□□□ 1
LGR4-202ENST00000389858 CELF6Q96J87 481 aaKnown RBP21.31■■□□□ 1
LGR4-202ENST00000389858 USP20Q9Y2K6 914 aa21.31■■□□□ 1
LGR4-202ENST00000389858 ERVK-9P63128 1117 aa21.31■■□□□ 1
LGR4-202ENST00000389858 P3H2Q8IVL5 708 aa21.31■■□□□ 1
LGR4-202ENST00000389858 CIPCQ9C0C6 399 aa21.31■■□□□ 1
LGR4-202ENST00000389858 RIMBP3CA6NJZ7 1639 aa21.3■■□□□ 1
LGR4-202ENST00000389858 RIMBP3BA6NNM3 1639 aa21.3■■□□□ 1
LGR4-202ENST00000389858 RIMBP3Q9UFD9 1639 aa21.3■■□□□ 1
LGR4-202ENST00000389858 PLA2G6O60733 806 aa21.3■■□□□ 1
LGR4-202ENST00000389858 GRK2P25098 689 aa21.3■■□□□ 1
LGR4-202ENST00000389858 SERPINB5P36952 375 aa21.3■■□□□ 1
LGR4-202ENST00000389858 TBX4P57082 545 aa21.3■■□□□ 1
LGR4-202ENST00000389858 PLOD1Q02809 727 aaPredicted RBP21.3■■□□□ 1
LGR4-202ENST00000389858 ILDR1Q86SU0 546 aaPredicted RBP21.3■■□□□ 1
LGR4-202ENST00000389858 MAGEB16A2A368 324 aa21.3■■□□□ 1
LGR4-202ENST00000389858 HOXC6P09630 235 aa21.3■■□□□ 1
LGR4-202ENST00000389858 MAPK1P28482 360 aa21.3■■□□□ 1
LGR4-202ENST00000389858 PSEN2P49810 448 aa21.3■■□□□ 1
LGR4-202ENST00000389858 NCALDP61601 193 aa21.3■■□□□ 1
LGR4-202ENST00000389858 ITIH4Q14624 930 aa21.3■■□□□ 1
LGR4-202ENST00000389858 GALNTL6Q49A17 601 aa21.3■■□□□ 1
LGR4-202ENST00000389858 PLD3Q8IV08 490 aa21.3■■□□□ 1
LGR4-202ENST00000389858 CDCA5Q96FF9 252 aa21.3■■□□□ 1
LGR4-202ENST00000389858 SLC40A1Q9NP59 571 aa21.3■■□□□ 1
LGR4-202ENST00000389858 XPNPEP3Q9NQH7 507 aa21.3■■□□□ 1
LGR4-202ENST00000389858 SCN3BQ9NY72 215 aa21.3■■□□□ 1
LGR4-202ENST00000389858 NCKIPSDQ9NZQ3 722 aa21.3■■□□□ 1
LGR4-202ENST00000389858 APPL1Q9UKG1 709 aa21.3■■□□□ 1
LGR4-202ENST00000389858 DNAJC16Q9Y2G8 782 aa21.3■■□□□ 1
LGR4-202ENST00000389858 SERPINF2P08697 491 aa21.3■■□□□ 1
LGR4-202ENST00000389858 CPA3P15088 417 aa21.3■■□□□ 1
LGR4-202ENST00000389858 H2AFXP16104 143 aaPredicted RBP21.3■■□□□ 1
LGR4-202ENST00000389858 CAMK2GQ13555 558 aaPredicted RBP21.3■■□□□ 1
LGR4-202ENST00000389858 ZFYVE19Q96K21 471 aa21.3■■□□□ 1
LGR4-202ENST00000389858 MAP2P11137 1827 aaKnown RBP21.3■■□□□ 1
LGR4-202ENST00000389858 ACVR2BQ13705 512 aa21.3■■□□□ 1
LGR4-202ENST00000389858 RETSATQ6NUM9 610 aa21.3■■□□□ 1
LGR4-202ENST00000389858 ADCK1Q86TW2 530 aa21.3■■□□□ 1
LGR4-202ENST00000389858 TMCO5AQ8N6Q1 288 aa21.3■■□□□ 1
LGR4-202ENST00000389858 TRIM66O15016 1216 aa21.29■■□□□ 1
LGR4-202ENST00000389858 RAMP2O60895 175 aa21.29■■□□□ 1
LGR4-202ENST00000389858 KCNMA1Q12791 1236 aa21.29■■□□□ 1
LGR4-202ENST00000389858 CSHL1Q14406 222 aa21.29■■□□□ 1
LGR4-202ENST00000389858 FAM9CQ8IZT9 166 aa21.29■■□□□ 1
LGR4-202ENST00000389858 VPS50Q96JG6 964 aa21.29■■□□□ 1
LGR4-202ENST00000389858 ZBTB45Q96K62 511 aaPredicted RBP21.29■■□□□ 1
LGR4-202ENST00000389858 MTMR9Q96QG7 549 aa21.29■■□□□ 1
LGR4-202ENST00000389858 SLC24A3Q9HC58 644 aa21.29■■□□□ 1
LGR4-202ENST00000389858 GAKO14976 1311 aa21.29■■□□□ 1
LGR4-202ENST00000389858 DDX3XO00571 662 aaKnown RBP eCLIP21.29■■□□□ 14e-8■■■■■ 30.5
LGR4-202ENST00000389858 AP5Z1O43299 807 aa21.29■■□□□ 1
LGR4-202ENST00000389858 PSMA4P25789 261 aaKnown RBP21.29■■□□□ 1
LGR4-202ENST00000389858 KCNK18Q7Z418 384 aa21.29■■□□□ 1
LGR4-202ENST00000389858 CAVIN3Q969G5 261 aa21.29■■□□□ 1
LGR4-202ENST00000389858 DMAP1Q9NPF5 467 aaPredicted RBP21.29■■□□□ 1
LGR4-202ENST00000389858 DPP7Q9UHL4 492 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms