RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 MFN1Q8IWA4 741 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 ZNF384Q8TF68 577 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 INPP5DQ92835 1189 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 DACH2Q96NX9 599 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 FHDC1Q9C0D6 1143 aaPredicted RBP17.67■□□□□ 0.42
SGCB-201ENST00000381431 MYLK2Q9H1R3 596 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 VANGL2Q9ULK5 521 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 THP07101 528 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 THRAP10827 490 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 PLOD1Q02809 727 aaPredicted RBP17.67■□□□□ 0.42
SGCB-201ENST00000381431 NPNTQ6UXI9 565 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 DEFB107AQ8IZN7 70 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 HTR3CQ8WXA8 447 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 CCT7Q99832 543 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 EFCAB1Q9HAE3 211 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 RBM22Q9NW64 420 aaKnown RBP eCLIP17.67■□□□□ 0.42
SGCB-201ENST00000381431 VAV3Q9UKW4 847 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 ZNF711Q9Y462 761 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 CYP1A2P05177 515 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 TNFRSF8P28908 595 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 CPT1AP50416 773 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 GEMP55040 296 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 EXOC3L1Q86VI1 746 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 ZC3H15Q8WU90 426 aaKnown RBP17.67■□□□□ 0.42
SGCB-201ENST00000381431 SEMA4DQ92854 862 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 SH3KBP1Q96B97 665 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 DCUN1D1Q96GG9 259 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 PKD2L2Q9NZM6 624 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 TAGLN3Q9UI15 199 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 HES2Q9Y543 173 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 NCF1BA6NI72 391 aaPredicted RBP17.66■□□□□ 0.42
SGCB-201ENST00000381431 NCF1CA8MVU1 366 aaPredicted RBP17.66■□□□□ 0.42
SGCB-201ENST00000381431 PRRG1O14668 218 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 APOA4P06727 396 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 NCF1P14598 390 aaPredicted RBP17.66■□□□□ 0.42
SGCB-201ENST00000381431 TAS2R40P59535 323 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 DAB2P98082 770 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 USP6NLQ92738 828 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 CNBD2Q96M20 576 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 PCDHB18PQ96TA0 734 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 FICDQ9BVA6 458 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 DDX43Q9NXZ2 648 aaKnown RBP17.66■□□□□ 0.42
SGCB-201ENST00000381431 TSPAN3O60637 253 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 MYO1DO94832 1006 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 ODC1P11926 461 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 GRK2P25098 689 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 GRIK4Q16099 956 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 BMT2Q1RMZ1 405 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 CKAP2Q8WWK9 683 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 KREMEN1Q96MU8 473 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 TBCBQ99426 244 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 ASCC2Q9H1I8 757 aaPredicted RBP17.66■□□□□ 0.42
SGCB-201ENST00000381431 CYP39A1Q9NYL5 469 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 AAR2Q9Y312 384 aaKnown RBP17.66■□□□□ 0.42
SGCB-201ENST00000381431 ASTN2O75129 1339 aaPredicted RBP17.66■□□□□ 0.42
SGCB-201ENST00000381431 KRT16P08779 473 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 CRADDP78560 199 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 HYIQ5T013 277 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 ELMOD1Q8N336 334 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 OPTNQ96CV9 577 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 CPA4Q9UI42 421 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 ITGA11Q9UKX5 1188 aa17.66■□□□□ 0.42
SGCB-201ENST00000381431 GJB1P08034 283 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 DRG2P55039 364 aaKnown RBP17.65■□□□□ 0.42
SGCB-201ENST00000381431 FKBP1CQ5VVH2 108 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 SNX30Q5VWJ9 437 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 IZUMO2Q6UXV1 221 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 PHF21BQ96EK2 531 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 LRRC19Q9H756 370 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 UTP6Q9NYH9 597 aaKnown RBP17.65■□□□□ 0.42
SGCB-201ENST00000381431 TRPC5OSA6NMA1 111 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 RNF103O00237 685 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 FSBPO95073 299 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 CDC25CP30307 473 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 RANBP1P43487 201 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 KCNK10P57789 538 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 POU4F1Q01851 419 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 DSG1Q02413 1049 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 EFEMP1Q12805 493 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 FUT11Q495W5 492 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 IYDQ6PHW0 289 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.65■□□□□ 0.42
SGCB-201ENST00000381431 PLEKHH3Q7Z736 793 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 UNC45BQ8IWX7 931 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 MRIQ9BWK5 157 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 SNX13Q9Y5W8 968 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 BTNL10A8MVZ5 291 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 SPTLC1O15269 473 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 SNHG28P0DPA3 235 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 RPL22P35268 128 aaKnown RBP17.65■□□□□ 0.42
SGCB-201ENST00000381431 GP5P40197 560 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 MAPRE1Q15691 268 aaKnown RBP17.65■□□□□ 0.42
SGCB-201ENST00000381431 ZCWPW2Q504Y3 356 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 PTAR1Q7Z6K3 402 aaPredicted RBP17.65■□□□□ 0.42
SGCB-201ENST00000381431 CNPY4Q8N129 248 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 GTF3C2Q8WUA4 911 aaPredicted RBP17.65■□□□□ 0.42
SGCB-201ENST00000381431 APOPT1Q96IL0 206 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 NT5MQ9NPB1 228 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 NCANO14594 1321 aa17.65■□□□□ 0.42
SGCB-201ENST00000381431 MYO5BQ9ULV0 1848 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms