RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 EHHADHQ08426 723 aa16.87■□□□□ 0.29
VCX3A-201ENST00000381089 COL9A2Q14055 689 aaPredicted RBP16.87■□□□□ 0.29
VCX3A-201ENST00000381089 KIAA1324Q6UXG2 1013 aaKnown RBP16.87■□□□□ 0.29
VCX3A-201ENST00000381089 SLC41A1Q8IVJ1 513 aa16.87■□□□□ 0.29
VCX3A-201ENST00000381089 CRYBG2Q8N1P7 616 aa16.87■□□□□ 0.29
VCX3A-201ENST00000381089 CHCHD4Q8N4Q1 142 aa16.87■□□□□ 0.29
VCX3A-201ENST00000381089 WBP2Q969T9 261 aa16.87■□□□□ 0.29
VCX3A-201ENST00000381089 ZNF419Q96HQ0 510 aaPredicted RBP16.87■□□□□ 0.29
VCX3A-201ENST00000381089 ZDHHC5Q9C0B5 715 aa16.87■□□□□ 0.29
VCX3A-201ENST00000381089 DNMT3LQ9UJW3 386 aa16.87■□□□□ 0.29
VCX3A-201ENST00000381089 LHX6Q9UPM6 363 aa16.87■□□□□ 0.29
VCX3A-201ENST00000381089 SCML2Q9UQR0 700 aa16.87■□□□□ 0.29
VCX3A-201ENST00000381089 PCDHA5Q9Y5H7 936 aa16.87■□□□□ 0.29
VCX3A-201ENST00000381089 WDFY3Q8IZQ1 3526 aa16.87■□□□□ 0.29
VCX3A-201ENST00000381089 PKD1L2Q7Z442 2459 aa16.87■□□□□ 0.29
VCX3A-201ENST00000381089 ZFYVE26Q68DK2 2539 aa16.87■□□□□ 0.29
VCX3A-201ENST00000381089 BAHCC1Q9P281 2608 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 PCDH15Q96QU1 1955 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 FAM221BA6H8Z2 402 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 MEI4A8MW99 385 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 NPC1O15118 1278 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 TBX18O95935 607 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 C4BPAP04003 597 aaKnown RBP16.86■□□□□ 0.29
VCX3A-201ENST00000381089 CD59P13987 128 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 PLA2G4AP47712 749 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 ZNF132P52740 706 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 NDST1P52848 882 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 TRIP6Q15654 476 aaKnown RBP16.86■□□□□ 0.29
VCX3A-201ENST00000381089 KLHDC10Q6PID8 442 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 LRSAM1Q6UWE0 723 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 SPRYD3Q8NCJ5 442 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 ZMIZ2Q8NF64 920 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 UCMAQ8WVF2 138 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 MRGPRX1Q96LB2 322 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 CDK5RAP1Q96SZ6 601 aaKnown RBP16.86■□□□□ 0.29
VCX3A-201ENST00000381089 ACOX2Q99424 681 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 IMPG2Q9BZV3 1241 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 SDCBP2Q9H190 292 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 BLZF1Q9H2G9 400 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 FAM49BQ9NUQ9 324 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 CACNA2D2Q9NY47 1150 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 HCN2Q9UL51 889 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 ZNF510Q9Y2H8 683 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 RAD54BQ9Y620 910 aa16.86■□□□□ 0.29
VCX3A-201ENST00000381089 PRRT4C9JH25 899 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 BEST1O76090 585 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 ADORA2BP29275 332 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 CD6P30203 668 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 PSEN1P49768 467 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 RING1Q06587 406 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 C10orf120Q5SQS8 335 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 SHC4Q6S5L8 630 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 TOGARAM2Q6ZUX3 1019 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 RAB44Q7Z6P3 723 aaPredicted RBP16.85■□□□□ 0.29
VCX3A-201ENST00000381089 HSCBQ8IWL3 235 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 CEP57L1Q8IYX8 460 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 OR2I1PQ8NGU4 316 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 ERLEC1Q96DZ1 483 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 CD248Q9HCU0 757 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 PNPLA8Q9NP80 782 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 FOXD4L1Q9NU39 408 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 NFE2L3Q9Y4A8 694 aa16.85■□□□□ 0.29
VCX3A-201ENST00000381089 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.84■□□□□ 0.29
VCX3A-201ENST00000381089 A0A1B0GTW7 788 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 CYP26A1O43174 497 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 SH3BP5O60239 455 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 SYNCRIPO60506 623 aaKnown RBP16.84■□□□□ 0.29
VCX3A-201ENST00000381089 GREM1O60565 184 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 VNN1O95497 513 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 RALAP11233 206 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 RARGP13631 454 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 ACO1P21399 889 aaKnown RBP16.84■□□□□ 0.29
VCX3A-201ENST00000381089 CHKAP35790 457 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 PIK3CAP42336 1068 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 AFMP43652 599 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 FAM193AP78312 1265 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 ORC1Q13415 861 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 ACAP1Q15027 740 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 ZACNQ401N2 412 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 METTL3Q86U44 580 aaKnown RBP16.84■□□□□ 0.29
VCX3A-201ENST00000381089 SLC9A9Q8IVB4 645 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 NAXDQ8IW45 347 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 C12orf29Q8N999 325 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 PLEKHO2Q8TD55 490 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 BHMTQ93088 406 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 JAKMIP2Q96AA8 810 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 HNRNPABQ99729 332 aaKnown RBP16.84■□□□□ 0.29
VCX3A-201ENST00000381089 PRDM16Q9HAZ2 1276 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 EXOC1Q9NV70 894 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 NAGPAQ9UK23 515 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 APOBEC2Q9Y235 224 aaKnown RBP16.84■□□□□ 0.29
VCX3A-201ENST00000381089 FRMD4BQ9Y2L6 1034 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 DMXL2Q8TDJ6 3036 aa16.84■□□□□ 0.29
VCX3A-201ENST00000381089 A0A1W2PQH9 124 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 IKBKBO14920 756 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 CASP1P29466 404 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 OXTRP30559 389 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 PGFP49763 221 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 GRIK2Q13002 908 aa16.83■□□□□ 0.28
VCX3A-201ENST00000381089 CUL4BQ13620 913 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms