RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 DDX20Q9UHI6 824 aaKnown RBP24.01■■□□□ 1.43
VPS16-201ENST00000380443 PGK1P00558 417 aa24■■□□□ 1.43
VPS16-201ENST00000380443 MLH1P40692 756 aa24■■□□□ 1.43
VPS16-201ENST00000380443 AIF1P55008 147 aa24■■□□□ 1.43
VPS16-201ENST00000380443 ADCY1Q08828 1119 aa24■■□□□ 1.43
VPS16-201ENST00000380443 FASTKD3Q14CZ7 662 aaKnown RBP24■■□□□ 1.43
VPS16-201ENST00000380443 C6orf89Q6UWU4 347 aa24■■□□□ 1.43
VPS16-201ENST00000380443 SIX6OS1Q8N1H7 587 aa24■■□□□ 1.43
VPS16-201ENST00000380443 DYDC1Q8WWB3 177 aa24■■□□□ 1.43
VPS16-201ENST00000380443 SEC16BQ96JE7 1060 aa24■■□□□ 1.43
VPS16-201ENST00000380443 GAD1Q99259 594 aa24■■□□□ 1.43
VPS16-201ENST00000380443 PRMT1Q99873 361 aaKnown RBP24■■□□□ 1.43
VPS16-201ENST00000380443 MED10Q9BTT4 135 aa24■■□□□ 1.43
VPS16-201ENST00000380443 KLC2Q9H0B6 622 aa24■■□□□ 1.43
VPS16-201ENST00000380443 C10orf88Q9H8K7 445 aa24■■□□□ 1.43
VPS16-201ENST00000380443 KCNK9Q9NPC2 374 aa24■■□□□ 1.43
VPS16-201ENST00000380443 XPNPEP3Q9NQH7 507 aa24■■□□□ 1.43
VPS16-201ENST00000380443 DDX43Q9NXZ2 648 aaKnown RBP24■■□□□ 1.43
VPS16-201ENST00000380443 PSMC3IPQ9P2W1 217 aaPredicted RBP24■■□□□ 1.43
VPS16-201ENST00000380443 CTNNAL1Q9UBT7 734 aa24■■□□□ 1.43
VPS16-201ENST00000380443 SQORQ9Y6N5 450 aa24■■□□□ 1.43
VPS16-201ENST00000380443 HACD1B0YJ81 288 aa24■■□□□ 1.43
VPS16-201ENST00000380443 KCNN4O15554 427 aa24■■□□□ 1.43
VPS16-201ENST00000380443 PCSK1P29120 753 aa24■■□□□ 1.43
VPS16-201ENST00000380443 ARL4AP40617 200 aa24■■□□□ 1.43
VPS16-201ENST00000380443 GEMIN4P57678 1058 aaKnown RBP24■■□□□ 1.43
VPS16-201ENST00000380443 ADIGQ0VDE8 80 aa24■■□□□ 1.43
VPS16-201ENST00000380443 FNBP1LQ5T0N5 605 aa24■■□□□ 1.43
VPS16-201ENST00000380443 DSTYKQ6XUX3 929 aa24■■□□□ 1.43
VPS16-201ENST00000380443 PAQR9Q6ZVX9 377 aa24■■□□□ 1.43
VPS16-201ENST00000380443 BNIPLQ7Z465 357 aa24■■□□□ 1.43
VPS16-201ENST00000380443 PALM2Q8IXS6 379 aa24■■□□□ 1.43
VPS16-201ENST00000380443 TNS4Q8IZW8 715 aa24■■□□□ 1.43
VPS16-201ENST00000380443 DEFB106AQ8N104 65 aa24■■□□□ 1.43
VPS16-201ENST00000380443 CYP4X1Q8N118 509 aa24■■□□□ 1.43
VPS16-201ENST00000380443 PCSK9Q8NBP7 692 aaKnown RBP24■■□□□ 1.43
VPS16-201ENST00000380443 PGBD4Q96DM1 585 aa24■■□□□ 1.43
VPS16-201ENST00000380443 SLC2A13Q96QE2 648 aa24■■□□□ 1.43
VPS16-201ENST00000380443 SLC9A7Q96T83 725 aa24■■□□□ 1.43
VPS16-201ENST00000380443 SYT15Q9BQS2 421 aa24■■□□□ 1.43
VPS16-201ENST00000380443 RRN3Q9NYV6 651 aa24■■□□□ 1.43
VPS16-201ENST00000380443 FZD10Q9ULW2 581 aa24■■□□□ 1.43
VPS16-201ENST00000380443 GABRQQ9UN88 632 aa24■■□□□ 1.43
VPS16-201ENST00000380443 SMG5Q9UPR3 1016 aaKnown RBP24■■□□□ 1.43
VPS16-201ENST00000380443 ARL5CA6NH57 179 aa23.99■■□□□ 1.43
VPS16-201ENST00000380443 RASA4BC9J798 803 aa23.99■■□□□ 1.43
VPS16-201ENST00000380443 RASA4O43374 803 aa23.99■■□□□ 1.43
VPS16-201ENST00000380443 GCATO75600 419 aa23.99■■□□□ 1.43
VPS16-201ENST00000380443 GCAP28676 217 aa23.99■■□□□ 1.43
VPS16-201ENST00000380443 SLC45A4Q5BKX6 768 aa23.99■■□□□ 1.43
VPS16-201ENST00000380443 PPP6R3Q5H9R7 873 aaPredicted RBP23.99■■□□□ 1.43
VPS16-201ENST00000380443 CLEC20AQ6ZU45 233 aa23.99■■□□□ 1.43
VPS16-201ENST00000380443 TRABD2AQ86V40 505 aa23.99■■□□□ 1.43
VPS16-201ENST00000380443 NPY6RQ99463 290 aa23.99■■□□□ 1.43
VPS16-201ENST00000380443 ACSS3Q9H6R3 686 aa23.99■■□□□ 1.43
VPS16-201ENST00000380443 SSU72Q9NP77 194 aaKnown RBP23.99■■□□□ 1.43
VPS16-201ENST00000380443 MTMR10Q9NXD2 777 aa23.99■■□□□ 1.43
VPS16-201ENST00000380443 RABGEF1Q9UJ41 708 aa23.99■■□□□ 1.43
VPS16-201ENST00000380443 HEY1Q9Y5J3 304 aa23.99■■□□□ 1.43
VPS16-201ENST00000380443 GOLGA8MH3BSY2 632 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 TMEM63AO94886 807 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 SULT1E1P49888 294 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 GPX6P59796 221 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 TMED2Q15363 201 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 MDH1BQ5I0G3 518 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 PIGWQ7Z7B1 504 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 MCUQ8NE86 351 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 RAET1EQ8TD07 263 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 CKAP2Q8WWK9 683 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 CSPG4P5Q96PW8 444 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 POPDC2Q9HBU9 364 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 CNGB3Q9NQW8 809 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 TBK1Q9UHD2 729 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 CLUHO75153 1309 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 SF3B1O75533 1304 aaKnown RBP eCLIP23.98■■□□□ 1.438e-6■■■■■ 107
VPS16-201ENST00000380443 ARHGEF37A1IGU5 675 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 PRPF4O43172 522 aaKnown RBP eCLIP23.98■■□□□ 1.436e-8■■■□□ 15.4
VPS16-201ENST00000380443 ATP2C2O75185 946 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 CABYRO75952 493 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 CTSHP09668 335 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 PRKCZQ05513 592 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 CACNB2Q08289 660 aaPredicted RBP23.98■■□□□ 1.43
VPS16-201ENST00000380443 AGMOQ6ZNB7 445 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 C3orf62Q6ZUJ4 267 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 SRRM1Q8IYB3 904 aaKnown RBP23.98■■□□□ 1.43
VPS16-201ENST00000380443 OTUD6BQ8N6M0 293 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 ANKS4BQ8N8V4 417 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 FBXO36Q8NEA4 188 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 FAM149B1Q96BN6 582 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 LRRC39Q96DD0 335 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 CABS1Q96KC9 395 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 KCTD15Q96SI1 283 aaPredicted RBP23.98■■□□□ 1.43
VPS16-201ENST00000380443 SAMD15Q9P1V8 674 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 DSEQ9UL01 958 aa23.98■■□□□ 1.43
VPS16-201ENST00000380443 FAM47DPA6NHR8 397 aa23.97■■□□□ 1.43
VPS16-201ENST00000380443 C9IYK1 514 aa23.97■■□□□ 1.43
VPS16-201ENST00000380443 POC1B-GALNT4F8VUJ3 575 aa23.97■■□□□ 1.43
VPS16-201ENST00000380443 ASGR1P07306 291 aa23.97■■□□□ 1.43
VPS16-201ENST00000380443 TFE3P19532 575 aaPredicted RBP23.97■■□□□ 1.43
VPS16-201ENST00000380443 RBL1P28749 1068 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms