RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 GREB1LQ9C091 1923 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 LOC100653049A0A140TA62 436 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 KRT34O76011 436 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 ASS1P00966 412 aaKnown RBP12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 PRKCBP05771 671 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 ATXN3P54252 364 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 ATXN1P54253 815 aaKnown RBP12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 EPHB1P54762 984 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 BACE1P56817 501 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 FKBP1AP62942 108 aaKnown RBP12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 SLC44A4Q53GD3 710 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 CES3Q6UWW8 571 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 TRIM72Q6ZMU5 477 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 POLNQ7Z5Q5 900 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 RSPH3Q86UC2 560 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 NSL1Q96IY1 281 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 NDE1Q9NXR1 346 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 ZNF180Q9UJW8 692 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 BARX2Q9UMQ3 279 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 SH3GLB1Q9Y371 365 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 NOP56O00567 594 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 FCHO1O14526 889 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 ZC3H11AO75152 810 aaKnown RBP eCLIP12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 PDGFRAP16234 1089 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 ZNF200P98182 395 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 DPYSL3Q14195 570 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 CHI3L2Q15782 390 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 SLFN12LQ6IEE8 588 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 TRMT10BQ6PF06 316 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 NCCRP1Q6ZVX7 275 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 GPRASP2Q96D09 838 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 MOCOSQ96EN8 888 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 PTCD3Q96EY7 689 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 CPB2Q96IY4 423 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 CATSPER2Q96P56 530 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 APOL6Q9BWW8 343 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 ANGPTL2Q9UKU9 493 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 KIF13BQ9NQT8 1826 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 LYPLA1O75608 230 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 NFICP08651 508 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 CDK4P11802 303 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 RBL1P28749 1068 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 GTF2A2P52657 109 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 SNRPFP62306 86 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 BTKQ06187 659 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 PIGHQ14442 188 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 STXBP2Q15833 593 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 SULF1Q8IWU6 871 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 B3GNT5Q9BYG0 378 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 SAR1AQ9NR31 198 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 ZNF214Q9UL59 606 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 USP18Q9UMW8 372 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 TRIM43BA6NCK2 446 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 C2CD2LO14523 706 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 TCEA3O75764 348 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 ZMPSTE24O75844 475 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 HSDL1Q3SXM5 330 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 ZNF667Q5HYK9 610 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 LPCAT4Q643R3 524 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 KLC3Q6P597 504 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 LRRC8BQ6P9F7 803 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 SRPK1Q96SB4 655 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 PFDN4Q9NQP4 134 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 SEPT10Q9P0V9 454 aa12.91□□□□□ -0.34
PRPF40B-202ENST00000380281 PMM2O15305 246 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 MAGEB2O15479 319 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 ALOX15P16050 662 aaPredicted RBP12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 COG7P83436 770 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 ROR1Q01973 937 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 DLG1Q12959 904 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 UBAP2LQ14157 1087 aaKnown RBP12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 BTG3Q14201 252 aaPredicted RBP12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 RASA2Q15283 850 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 RIPOR1Q6ZS17 1223 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 SCUBE3Q8IX30 993 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 ZNF280CQ8ND82 737 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 SLC35B2Q8TB61 432 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 PPP2R3CQ969Q6 453 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 CORO1BQ9BR76 489 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 ACAD9Q9H845 621 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 ZC3H7BQ9UGR2 993 aaKnown RBP12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 CIDEBQ9UHD4 219 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 SHOC2Q9UQ13 582 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 TBC1D30Q9Y2I9 924 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 PLSCR1O15162 318 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 PRPF4O43172 522 aaKnown RBP eCLIP12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 HCRTO43612 131 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 TNNC2P02585 160 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 HMGCRP04035 888 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 UBA1P22314 1058 aaKnown RBP12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 NAMPTP43490 491 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 GJA8P48165 433 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 AQP5P55064 265 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 MED21Q13503 144 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 EFHC2Q5JST6 749 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 ANGEL2Q5VTE6 544 aaKnown RBP12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 NDUFAF2Q8N183 169 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 DCAKDQ8WVC6 231 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 PEBP4Q96S96 227 aa12.9□□□□□ -0.34
PRPF40B-202ENST00000380281 TEX13BQ9BXU2 312 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms