RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 ELAC2Q9BQ52 826 aaKnown RBP22.41■■□□□ 1.18
TRIM54-202ENST00000380075 PLCD4Q9BRC7 762 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 SNX25Q9H3E2 840 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 SSU72Q9NP77 194 aaKnown RBP22.41■■□□□ 1.18
TRIM54-202ENST00000380075 XPO7Q9UIA9 1087 aaKnown RBP22.41■■□□□ 1.18
TRIM54-202ENST00000380075 NOD1Q9Y239 953 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 CAPN7Q9Y6W3 813 aa22.41■■□□□ 1.18
TRIM54-202ENST00000380075 CCT8L1PA6NM43 557 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 TCP11X1B4DZS4 312 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 POC1B-GALNT4F8VUJ3 575 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 GOLGA8MH3BSY2 632 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 H7C0C1 242 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 CHADO15335 359 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 FAM163BP0C2L3 166 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 GNL1P36915 607 aaPredicted RBP22.4■■□□□ 1.18
TRIM54-202ENST00000380075 ATP5OP48047 213 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 GPX6P59796 221 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 MPP2Q14168 576 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 ANKRD20A8PQ5CZ79 823 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 ZC3H12AQ5D1E8 599 aaKnown RBP22.4■■□□□ 1.18
TRIM54-202ENST00000380075 SCYL2Q6P3W7 929 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 SCUBE3Q8IX30 993 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 KBTBD7Q8WVZ9 684 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 TNIP3Q96KP6 325 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 SNRNP25Q9BV90 132 aaKnown RBP22.4■■□□□ 1.18
TRIM54-202ENST00000380075 C10orf88Q9H8K7 445 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 CLUHO75153 1309 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 SCN1AP35498 2009 aa22.4■■□□□ 1.18
TRIM54-202ENST00000380075 OAS1P00973 400 aaKnown RBP22.39■■□□□ 1.18
TRIM54-202ENST00000380075 ZFXP17010 805 aaPredicted RBP22.39■■□□□ 1.18
TRIM54-202ENST00000380075 IL4RP24394 825 aa22.39■■□□□ 1.18
TRIM54-202ENST00000380075 AKAP5P24588 427 aa22.39■■□□□ 1.18
TRIM54-202ENST00000380075 BCAR1P56945 870 aa22.39■■□□□ 1.18
TRIM54-202ENST00000380075 BASP1P80723 227 aaKnown RBP22.39■■□□□ 1.18
TRIM54-202ENST00000380075 FNBP1LQ5T0N5 605 aa22.39■■□□□ 1.18
TRIM54-202ENST00000380075 APPL2Q8NEU8 664 aa22.39■■□□□ 1.18
TRIM54-202ENST00000380075 CENPIQ92674 756 aaPredicted RBP22.39■■□□□ 1.18
TRIM54-202ENST00000380075 SMC6Q96SB8 1091 aa22.39■■□□□ 1.18
TRIM54-202ENST00000380075 HTATIP2Q9BUP3 242 aa22.39■■□□□ 1.18
TRIM54-202ENST00000380075 ACSS3Q9H6R3 686 aa22.39■■□□□ 1.18
TRIM54-202ENST00000380075 RABGEF1Q9UJ41 708 aa22.39■■□□□ 1.18
TRIM54-202ENST00000380075 PDCD11Q14690 1871 aaKnown RBP22.39■■□□□ 1.18
TRIM54-202ENST00000380075 BCLAF3A2AJT9 711 aaKnown RBP22.39■■□□□ 1.17
TRIM54-202ENST00000380075 H0YHG0 523 aa22.39■■□□□ 1.17
TRIM54-202ENST00000380075 SPAG6O75602 509 aa22.39■■□□□ 1.17
TRIM54-202ENST00000380075 TMEM63AO94886 807 aa22.39■■□□□ 1.17
TRIM54-202ENST00000380075 KRT15P19012 456 aa22.39■■□□□ 1.17
TRIM54-202ENST00000380075 UBXN11Q5T124 520 aa22.39■■□□□ 1.17
TRIM54-202ENST00000380075 ANKMY2Q8IV38 441 aa22.39■■□□□ 1.17
TRIM54-202ENST00000380075 WNT8BQ93098 351 aa22.39■■□□□ 1.17
TRIM54-202ENST00000380075 GRAMD1AQ96CP6 724 aa22.39■■□□□ 1.17
TRIM54-202ENST00000380075 C11orf84Q9BUA3 381 aaPredicted RBP22.39■■□□□ 1.17
TRIM54-202ENST00000380075 APOL6Q9BWW8 343 aa22.39■■□□□ 1.17
TRIM54-202ENST00000380075 TRABDQ9H4I3 376 aa22.39■■□□□ 1.17
TRIM54-202ENST00000380075 USP15Q9Y4E8 981 aaPredicted RBP22.39■■□□□ 1.17
TRIM54-202ENST00000380075 HDAC4P56524 1084 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 DPYSL2Q16555 572 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 NUGGCQ68CJ6 796 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 NPNTQ6UXI9 565 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 SERINC5Q86VE9 423 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 ZC3H18Q86VM9 953 aaKnown RBP22.38■■□□□ 1.17
TRIM54-202ENST00000380075 PALM2Q8IXS6 379 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 CNPY4Q8N129 248 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 FBXO36Q8NEA4 188 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 TMEM40Q8WWA1 233 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 TGS1Q96RS0 853 aaKnown RBP22.38■■□□□ 1.17
TRIM54-202ENST00000380075 DPEP3Q9H4B8 488 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 USP29Q9HBJ7 922 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 GABBR2O75899 941 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 SUN1O94901 812 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 GSTA1P08263 222 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 KCNJ11Q14654 390 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 RAB6CQ53S08 254 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 HP1BP3Q5SSJ5 553 aaPredicted RBP22.38■■□□□ 1.17
TRIM54-202ENST00000380075 C3orf62Q6ZUJ4 267 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 TOP6BLQ8N6T0 577 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 PQLC3Q8N755 202 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 DHRS4Q9BTZ2 278 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 RAB6CQ9H0N0 254 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 PRDM16Q9HAZ2 1276 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 PCDH10Q9P2E7 1040 aa22.38■■□□□ 1.17
TRIM54-202ENST00000380075 TRIP11Q15643 1979 aa22.37■■□□□ 1.17
TRIM54-202ENST00000380075 HUS1O60921 280 aa22.37■■□□□ 1.17
TRIM54-202ENST00000380075 WARSP23381 471 aaKnown RBP22.37■■□□□ 1.17
TRIM54-202ENST00000380075 XRCC4Q13426 336 aa22.37■■□□□ 1.17
TRIM54-202ENST00000380075 BBS9Q3SYG4 887 aa22.37■■□□□ 1.17
TRIM54-202ENST00000380075 MSS51Q4VC12 460 aa22.37■■□□□ 1.17
TRIM54-202ENST00000380075 C1orf228Q6PIY5 440 aa22.37■■□□□ 1.17
TRIM54-202ENST00000380075 ADGRD1Q6QNK2 874 aa22.37■■□□□ 1.17
TRIM54-202ENST00000380075 DPF3Q92784 378 aa22.37■■□□□ 1.17
TRIM54-202ENST00000380075 FGFR1OP2Q9NVK5 253 aa22.37■■□□□ 1.17
TRIM54-202ENST00000380075 FOXO6A8MYZ6 492 aa22.36■■□□□ 1.17
TRIM54-202ENST00000380075 ZBED1O96006 694 aa22.36■■□□□ 1.17
TRIM54-202ENST00000380075 CLTBP09497 229 aa22.36■■□□□ 1.17
TRIM54-202ENST00000380075 FGFR1P11362 822 aa22.36■■□□□ 1.17
TRIM54-202ENST00000380075 LRPAP1P30533 357 aa22.36■■□□□ 1.17
TRIM54-202ENST00000380075 PTK7Q13308 1070 aa22.36■■□□□ 1.17
TRIM54-202ENST00000380075 SPARCL1Q14515 664 aa22.36■■□□□ 1.17
TRIM54-202ENST00000380075 EFHC1Q5JVL4 640 aa22.36■■□□□ 1.17
TRIM54-202ENST00000380075 RGS9BPQ6ZS82 235 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms