RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 FCHO2Q0JRZ9 810 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 ARHGAP29Q52LW3 1261 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 ACAD10Q6JQN1 1059 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 OLFML1Q6UWY5 402 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 VITQ6UXI7 678 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 FAM183BPQ6ZVS7 135 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 SLC26A9Q7LBE3 791 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 YAF2Q8IY57 180 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 UBALD2Q8IYN6 164 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 SLC30A5Q8TAD4 765 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 SH3RF2Q8TEC5 729 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 CLEC4CQ8WTT0 213 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 RSAD2Q8WXG1 361 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 NDRG1Q92597 394 aaKnown RBP12.47□□□□□ -0.41
PCNA-201ENST00000379143 VCPIP1Q96JH7 1222 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 KXD1Q9BQD3 176 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.47□□□□□ -0.41
PCNA-201ENST00000379143 TRMT61BQ9BVS5 477 aaKnown RBP12.47□□□□□ -0.41
PCNA-201ENST00000379143 SMG9Q9H0W8 520 aaKnown RBP12.47□□□□□ -0.41
PCNA-201ENST00000379143 ADAM22Q9P0K1 906 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 IMPACTQ9P2X3 320 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 TJP2Q9UDY2 1190 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 SSU72P8A0A1W2PR75 194 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 LEFTY2O00292 366 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 DDX3XO00571 662 aaKnown RBP eCLIP12.46□□□□□ -0.417e-17■■□□□ 13.5
PCNA-201ENST00000379143 RTN2O75298 545 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 TBX18O95935 607 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 SRFP11831 508 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 CDK17Q00537 523 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 PFKPQ01813 784 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 USP4Q13107 963 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 MTF1Q14872 753 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 ZNF77Q15935 545 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 FAM102AQ5T9C2 384 aaPredicted RBP12.46□□□□□ -0.41
PCNA-201ENST00000379143 CC2D1AQ6P1N0 951 aaPredicted RBP12.46□□□□□ -0.41
PCNA-201ENST00000379143 MSANTD2Q6P1R3 559 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 MMS22LQ6ZRQ5 1243 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 HFE2Q6ZVN8 426 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 ARCQ7LC44 396 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 XYLT1Q86Y38 959 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 MIB1Q86YT6 1006 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 EDEM1Q92611 657 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 IRF7Q92985 503 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 TRIM11Q96F44 468 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 C11orf70Q9BRQ4 267 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 DEF6Q9H4E7 631 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 GRPEL1Q9HAV7 217 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 TMEM51Q9NW97 253 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 RRN3Q9NYV6 651 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 MARCH2Q9P0N8 246 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 ARHGAP20Q9P2F6 1191 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 ADAMTS1Q9UHI8 967 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 RASAL2Q9UJF2 1139 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 DUSP12Q9UNI6 340 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 CCL26Q9Y258 94 aa12.46□□□□□ -0.41
PCNA-201ENST00000379143 USP34Q70CQ2 3546 aa12.46□□□□□ -0.42
PCNA-201ENST00000379143 E2F8A0AVK6 867 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 SLC9A3R1O14745 358 aaPredicted RBP12.45□□□□□ -0.42
PCNA-201ENST00000379143 ZNF263O14978 683 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 CHADO15335 359 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 FYNP06241 537 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 ALADP13716 330 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 EFEMP1Q12805 493 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 PTP4A2Q12974 167 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 NNTQ13423 1086 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 WDR59Q6PJI9 974 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 MON1BQ7L1V2 547 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 TC2NQ8N9U0 490 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 ZFRQ96KR1 1074 aaKnown RBP12.45□□□□□ -0.42
PCNA-201ENST00000379143 SERPINB11Q96P15 392 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 SLC2A13Q96QE2 648 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 RPP25Q9BUL9 199 aaKnown RBP12.45□□□□□ -0.42
PCNA-201ENST00000379143 KLF16Q9BXK1 252 aaPredicted RBP12.45□□□□□ -0.42
PCNA-201ENST00000379143 PLA2G2FQ9BZM2 168 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 DCLK3Q9C098 648 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 BRD9Q9H8M2 597 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 SLC2A4RGQ9NR83 387 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 SMPD4Q9NXE4 827 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 TBC1D14Q9P2M4 693 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 LSM7Q9UK45 103 aaKnown RBP12.45□□□□□ -0.42
PCNA-201ENST00000379143 NUDT5Q9UKK9 219 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 SH3BP1Q9Y3L3 701 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 HBS1LQ9Y450 684 aaKnown RBP12.45□□□□□ -0.42
PCNA-201ENST00000379143 ZNF318Q5VUA4 2279 aa12.45□□□□□ -0.42
PCNA-201ENST00000379143 GOLGA8SH3BPF8 625 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 DCXO43602 365 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 DAB1O75553 588 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 FTLP02792 175 aaPredicted RBP12.44□□□□□ -0.42
PCNA-201ENST00000379143 PLEKP08567 350 aaPredicted RBP12.44□□□□□ -0.42
PCNA-201ENST00000379143 MYBL1P10243 752 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 GDI1P31150 447 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 NOS2P35228 1153 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 MATKP42679 507 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 MRE11P49959 708 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 ZXDBP98169 803 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 RING1Q06587 406 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 GRM2Q14416 872 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 PDGFRLQ15198 375 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 TAF5Q15542 800 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 SLC18A3Q16572 532 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms