RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 EFR3AQ14156 821 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 SLC39A14Q15043 492 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 SNAP47Q5SQN1 464 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 PARGQ86W56 976 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 ENGASEQ8NFI3 743 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 TFB1MQ8WVM0 346 aaKnown RBP13.64□□□□□ -0.23
HIPK3-202ENST00000379016 HIC2Q96JB3 615 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 GSDMCQ9BYG8 508 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 ELOVL6Q9H5J4 265 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 GRID1Q9ULK0 1009 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 MTO1Q9Y2Z2 717 aaKnown RBP13.64□□□□□ -0.23
HIPK3-202ENST00000379016 RPAP1Q9BWH6 1393 aaPredicted RBP13.64□□□□□ -0.23
HIPK3-202ENST00000379016 ERI2A8K979 691 aaKnown RBP13.64□□□□□ -0.23
HIPK3-202ENST00000379016 USP17L15C9J2P7 530 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 USP17L13C9JLJ4 530 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 USP17L11C9JVI0 530 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 USP17L18D6R9N7 530 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 USP17L22D6RA61 530 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 USP17L17D6RBQ6 530 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 USP17L19D6RCP7 530 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 USP17L20D6RJB6 530 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 TEX46H3BTG2 121 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 OR10H2O60403 315 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 USP17L24Q0WX57 530 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 SPP2Q13103 211 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 USP17L6PQ6QN14 398 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 GPT2Q8TD30 523 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 CALR3Q96L12 384 aaKnown RBP13.64□□□□□ -0.23
HIPK3-202ENST00000379016 PPP1R2P1Q96PQ5 205 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 ABHD10Q9NUJ1 306 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 EVA1BQ9NVM1 165 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 USP17L5A8MUK1 530 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 F5H5T6 163 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 LTFP02788 710 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 CYP2B6P20813 491 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 PTGER2P43116 358 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 PPP2R2BQ00005 443 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 KNOP1Q1ED39 458 aaKnown RBP13.64□□□□□ -0.23
HIPK3-202ENST00000379016 KCNT1Q5JUK3 1230 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 TTC39CQ8N584 583 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 ATP6V0D2Q8N8Y2 350 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 GRIP2Q9C0E4 1043 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 EPB41L4AQ9HCS5 686 aaPredicted RBP13.64□□□□□ -0.23
HIPK3-202ENST00000379016 CHMP1AQ9HD42 196 aaPredicted RBP13.64□□□□□ -0.23
HIPK3-202ENST00000379016 MTMR6Q9Y217 621 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 SLC33A1O00400 549 aaPredicted RBP13.64□□□□□ -0.23
HIPK3-202ENST00000379016 ITGA1P56199 1179 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 COASYQ13057 564 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 CLCA4Q14CN2 919 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 SEMA4DQ92854 862 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 TMEM169Q96HH4 297 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 LXNQ9BS40 222 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 FRMD8Q9BZ67 464 aaPredicted RBP13.64□□□□□ -0.23
HIPK3-202ENST00000379016 TIAM1Q13009 1591 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 MTTPP55157 894 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 NR6A1Q15406 480 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 KYAT1Q16773 422 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 CHRDL2Q6WN34 429 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 ZCCHC7Q8N3Z6 543 aaKnown RBP13.63□□□□□ -0.23
HIPK3-202ENST00000379016 TERB1Q8NA31 727 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 USP13Q92995 863 aaPredicted RBP13.63□□□□□ -0.23
HIPK3-202ENST00000379016 ZBTB10Q96DT7 871 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 NSL1Q96IY1 281 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 GGA2Q9UJY4 613 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 PHKG2P15735 406 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 YY1P25490 414 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 HOXC12P31275 282 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 EZH2Q15910 746 aaKnown RBP13.63□□□□□ -0.23
HIPK3-202ENST00000379016 HSDL1Q3SXM5 330 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 CSGALNACT1Q8TDX6 532 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 TMEM143Q96AN5 459 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 EMILIN2Q9BXX0 1053 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 ILKAPQ9H0C8 392 aaPredicted RBP13.63□□□□□ -0.23
HIPK3-202ENST00000379016 MYL4P12829 197 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 MZT2BQ6NZ67 158 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 RBM15Q96T37 977 aaKnown RBP eCLIP13.63□□□□□ -0.23
HIPK3-202ENST00000379016 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.63□□□□□ -0.23
HIPK3-202ENST00000379016 GIT1Q9Y2X7 761 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 PSMD9O00233 223 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 MAP3K6O95382 1288 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 HSF2Q03933 536 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 LPCAT2Q7L5N7 544 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 PACS2Q86VP3 889 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 CENPSQ8N2Z9 138 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 ITCHQ96J02 903 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 C9orf72Q96LT7 481 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 ENTPD4Q9Y227 616 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 NCKAP1Q9Y2A7 1128 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 USP15Q9Y4E8 981 aaPredicted RBP13.63□□□□□ -0.23
HIPK3-202ENST00000379016 MRPL42Q9Y6G3 142 aaKnown RBP13.63□□□□□ -0.23
HIPK3-202ENST00000379016 PHF20L1A8MW92 1017 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 IL13P35225 146 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 HK2P52789 917 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 ATG14Q6ZNE5 492 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 ZNF483Q8TF39 744 aaPredicted RBP13.63□□□□□ -0.23
HIPK3-202ENST00000379016 AHSPQ9NZD4 102 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 GSTK1Q9Y2Q3 226 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 RTN2O75298 545 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 CHRNGP07510 517 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 RASA1P20936 1047 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms