RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 FOXR2Q6PJQ5 311 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 PRPF39Q86UA1 669 aaKnown RBP15.5■□□□□ 0.07
NPHP4-201ENST00000378156 CCNJLQ8IV13 435 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 NAT9Q9BTE0 207 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 TMEM134Q9H6X4 195 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 CTNNAL1Q9UBT7 734 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 POMCP01189 267 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 RAB27AP51159 221 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 GEMP55040 296 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 MARSP56192 900 aaKnown RBP15.5■□□□□ 0.07
NPHP4-201ENST00000378156 TMEM132BQ14DG7 1078 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 ZNF280DQ6N043 979 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 TTC30BQ8N4P2 665 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 C10orf88Q9H8K7 445 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 XPNPEP3Q9NQH7 507 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 AVENQ9NQS1 362 aaPredicted RBP15.5■□□□□ 0.07
NPHP4-201ENST00000378156 ALDH2P05091 517 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 HOXC6P09630 235 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 FOXD4Q12950 439 aaPredicted RBP15.5■□□□□ 0.07
NPHP4-201ENST00000378156 CDH18Q13634 790 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 BMT2Q1RMZ1 405 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 OVOS1Q6IE37 1185 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 DENND5BQ6ZUT9 1274 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 TINF2Q9BSI4 451 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 SHCBP1LQ9BZQ2 653 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 DLGAP2Q9P1A6 1054 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 SEPT3Q9UH03 358 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 XRN1Q8IZH2 1706 aaKnown RBP15.5■□□□□ 0.07
NPHP4-201ENST00000378156 ROBO3Q96MS0 1386 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 ELAVL2Q12926 359 aaKnown RBP15.49■□□□□ 0.07
NPHP4-201ENST00000378156 TRIP10Q15642 601 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 FSCN1Q16658 493 aaKnown RBP15.49■□□□□ 0.07
NPHP4-201ENST00000378156 TRIM60Q495X7 471 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 PTRHD1Q6GMV3 140 aaKnown RBP15.49■□□□□ 0.07
NPHP4-201ENST00000378156 C16orf89Q6UX73 402 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 MFN1Q8IWA4 741 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 ALG3Q92685 438 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 EME1Q96AY2 570 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 PCDH9Q9HC56 1237 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 ZNF212Q9UDV6 495 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 VAV3Q9UKW4 847 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 MYPNQ86TC9 1320 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 MAGEA13PA6NCF6 341 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 F5H5T6 163 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 O00370 1275 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 DNALI1O14645 258 aaPredicted RBP15.49■□□□□ 0.07
NPHP4-201ENST00000378156 ZC3H12BQ5HYM0 836 aaKnown RBP15.49■□□□□ 0.07
NPHP4-201ENST00000378156 FAM71AQ8IYT1 594 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 BHMTQ93088 406 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 BCL9LQ86UU0 1499 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 SDR42E2A6NKP2 422 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 RBAK-RBAKDNI3L0D1 243 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 ATP9AO75110 1047 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 PAEPP09466 180 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 ZSCAN5DPP0CG00 497 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 CDH2P19022 906 aaPredicted RBP15.49■□□□□ 0.07
NPHP4-201ENST00000378156 SSTR1P30872 391 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 COPS5Q92905 334 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 FAM84AQ96KN4 292 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 CINPQ9BW66 212 aaPredicted RBP15.49■□□□□ 0.07
NPHP4-201ENST00000378156 CASS4Q9NQ75 786 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 KANSL3Q9P2N6 904 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 AAR2Q9Y312 384 aaKnown RBP15.49■□□□□ 0.07
NPHP4-201ENST00000378156 NCANO14594 1321 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 STX7O15400 261 aaKnown RBP15.49■□□□□ 0.07
NPHP4-201ENST00000378156 SUPT3HO75486 399 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 GLRA2P23416 452 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 RGS4P49798 205 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 SLC44A4Q53GD3 710 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 MTDHQ86UE4 582 aaKnown RBP15.49■□□□□ 0.07
NPHP4-201ENST00000378156 SLC9A9Q8IVB4 645 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 TRPM4Q8TD43 1214 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 COG4Q9H9E3 785 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 SLC24A2Q9UI40 661 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 PCDHGB4Q9UN71 923 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 LZTS1Q9Y250 596 aa15.49■□□□□ 0.07
NPHP4-201ENST00000378156 CFAP99D6REC4 459 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 HNRNPRO43390 633 aaKnown RBP15.48■□□□□ 0.07
NPHP4-201ENST00000378156 ACAT1P24752 427 aaKnown RBP15.48■□□□□ 0.07
NPHP4-201ENST00000378156 HSPA13P48723 471 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 NFIL3Q16649 462 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 PRUNE1Q86TP1 453 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 SETD3Q86TU7 594 aaPredicted RBP15.48■□□□□ 0.07
NPHP4-201ENST00000378156 IQCKQ8N0W5 287 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 TMEM161BQ8NDZ6 487 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 MRPS31Q92665 395 aaKnown RBP15.48■□□□□ 0.07
NPHP4-201ENST00000378156 TRPM5Q9NZQ8 1165 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 F8VP50 259 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 PLA2G6O60733 806 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 EGFRP00533 1210 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 EFEMP1Q12805 493 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 TBCBQ99426 244 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 NFASCO94856 1347 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 CKMP06732 381 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 FMO1Q01740 532 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 ADCK1Q86TW2 530 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 SHOC2Q9UQ13 582 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 ATP11BQ9Y2G3 1177 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 PKP3Q9Y446 797 aa15.48■□□□□ 0.07
NPHP4-201ENST00000378156 JCHAINP01591 159 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms