RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 ACOT1Q86TX2 421 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 ZNF384Q8TF68 577 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 CYGBQ8WWM9 190 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.16□□□□□ -0.62
HIF3A-205ENST00000377670 COPS5Q92905 334 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 PJA2O43164 708 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 AKAP10O43572 662 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 PRMT3O60678 531 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 AOC2O75106 756 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 SYN1P17600 705 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 PDK1Q15118 436 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 TTLL9Q3SXZ7 439 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 SLC44A4Q53GD3 710 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 FBXO47Q5MNV8 452 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 CENPPQ6IPU0 288 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 HAS1Q92839 578 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 HES6Q96HZ4 224 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 SYT15Q9BQS2 421 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 APPL1Q9UKG1 709 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 ZNF541Q9H0D2 1346 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 C2orf81A6NN90 581 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 KPNA3O00505 521 aaPredicted RBP11.15□□□□□ -0.62
HIF3A-205ENST00000377670 TRIM16O95361 564 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 CALCAP01258 141 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 HALP42357 657 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 RARRES1P49788 294 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 UBE3AQ05086 875 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 TP53BP2Q13625 1128 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 DDIASQ8IXT1 998 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 IPMKQ8NFU5 416 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 SLC20A1Q8WUM9 679 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 ANKS1AQ92625 1134 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 VMP1Q96GC9 406 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 ZBTB45Q96K62 511 aaPredicted RBP11.15□□□□□ -0.62
HIF3A-205ENST00000377670 FAM84AQ96KN4 292 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 IKZF4Q9H2S9 585 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 SSU72P8A0A1W2PR75 194 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 KANSL1LA0AUZ9 987 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 KCNN4O15554 427 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 FBXO21O94952 628 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 GPD1P21695 349 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 VHLP40337 213 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 EIF3EP60228 445 aaKnown RBP11.15□□□□□ -0.62
HIF3A-205ENST00000377670 MRPL28Q13084 256 aaKnown RBP11.15□□□□□ -0.62
HIF3A-205ENST00000377670 P3H1Q32P28 736 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 SLC39A12Q504Y0 691 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 NOMO2Q5JPE7 1267 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 SPDYAQ5MJ70 313 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 PRR23BQ6ZRT6 265 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 C1orf131Q8NDD1 294 aaKnown RBP11.15□□□□□ -0.62
HIF3A-205ENST00000377670 CCT7Q99832 543 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 ARHGEF38Q9NXL2 777 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 F9P00740 461 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 ENO3P13929 434 aaPredicted RBP11.15□□□□□ -0.62
HIF3A-205ENST00000377670 SELPP16109 830 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 TNNI3P19429 210 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 CHRM3P20309 590 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 TARSP26639 723 aaKnown RBP11.15□□□□□ -0.62
HIF3A-205ENST00000377670 SEMA3FQ13275 785 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 MTA1Q13330 715 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 OR9Q1Q8NGQ5 310 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 ZNF507Q8TCN5 953 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 MTBPQ96DY7 904 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 SGSM3Q96HU1 749 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 ALG6Q9Y672 507 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 A0A0U1RQJ8 604 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 B2RBV5 119 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 BTBD19C9JJ37 291 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 SMIM10L2AP0DMW4 78 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 SMIM10L2BP0DMW5 78 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 CDKAL1Q5VV42 579 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 DUSP9Q99956 384 aaKnown RBP11.15□□□□□ -0.62
HIF3A-205ENST00000377670 FUT8Q9BYC5 575 aa11.15□□□□□ -0.62
HIF3A-205ENST00000377670 ATP6V1B1P15313 513 aa11.15□□□□□ -0.63
HIF3A-205ENST00000377670 CPA2P48052 419 aa11.15□□□□□ -0.63
HIF3A-205ENST00000377670 MAPRE2Q15555 327 aa11.15□□□□□ -0.63
HIF3A-205ENST00000377670 PLD3Q8IV08 490 aa11.15□□□□□ -0.63
HIF3A-205ENST00000377670 KRT35Q92764 455 aa11.15□□□□□ -0.63
HIF3A-205ENST00000377670 C9orf72Q96LT7 481 aa11.15□□□□□ -0.63
HIF3A-205ENST00000377670 OXCT2Q9BYC2 517 aaPredicted RBP11.15□□□□□ -0.63
HIF3A-205ENST00000377670 OSGEPQ9NPF4 335 aa11.15□□□□□ -0.63
HIF3A-205ENST00000377670 DDX20Q9UHI6 824 aaKnown RBP11.15□□□□□ -0.63
HIF3A-205ENST00000377670 UMODL1Q5DID0 1318 aa11.15□□□□□ -0.63
HIF3A-205ENST00000377670 MTA2O94776 668 aa11.14□□□□□ -0.63
HIF3A-205ENST00000377670 AMD1P17707 334 aa11.14□□□□□ -0.63
HIF3A-205ENST00000377670 SARSP49591 514 aaKnown RBP11.14□□□□□ -0.63
HIF3A-205ENST00000377670 LBX1P52954 281 aa11.14□□□□□ -0.63
HIF3A-205ENST00000377670 SLC47A2Q86VL8 602 aa11.14□□□□□ -0.63
HIF3A-205ENST00000377670 HNRNPLLQ8WVV9 542 aaKnown RBP11.14□□□□□ -0.63
HIF3A-205ENST00000377670 TSPAN17Q96FV3 270 aa11.14□□□□□ -0.63
HIF3A-205ENST00000377670 WDR18Q9BV38 432 aa11.14□□□□□ -0.63
HIF3A-205ENST00000377670 CHCHD3Q9NX63 227 aaKnown RBP11.14□□□□□ -0.63
HIF3A-205ENST00000377670 SESN2P58004 480 aaPredicted RBP11.14□□□□□ -0.63
HIF3A-205ENST00000377670 INPP5AQ14642 412 aa11.14□□□□□ -0.63
HIF3A-205ENST00000377670 HELQQ8TDG4 1101 aa11.14□□□□□ -0.63
HIF3A-205ENST00000377670 SMG7Q92540 1137 aaKnown RBP11.14□□□□□ -0.63
HIF3A-205ENST00000377670 VPS50Q96JG6 964 aa11.14□□□□□ -0.63
HIF3A-205ENST00000377670 UROC1Q96N76 676 aa11.14□□□□□ -0.63
HIF3A-205ENST00000377670 RBM15Q96T37 977 aaKnown RBP eCLIP11.14□□□□□ -0.63
HIF3A-205ENST00000377670 CCDC134Q9H6E4 229 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms