RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ADAM32Q8TC27 787 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 PGK1P00558 417 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 RENBPP51606 427 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 CCNJLQ8IV13 435 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 ZNF614Q8N883 585 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 SLC2A14Q8TDB8 520 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 COPS5Q92905 334 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 ZIM3Q96PE6 472 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 ECSITQ9BQ95 431 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 DCDC2Q9UHG0 476 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 GLRA3O75311 464 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 GZMAP12544 262 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 PREPLQ4J6C6 727 aaPredicted RBP14.04□□□□□ -0.16
GPC6-201ENST00000377047 RETSATQ6NUM9 610 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 ILDR2Q71H61 639 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 STRA8Q7Z7C7 330 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 SLC44A2Q8IWA5 706 aaPredicted RBP14.04□□□□□ -0.16
GPC6-201ENST00000377047 CEP41Q9BYV8 373 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 ELOVL4Q9GZR5 314 aa14.04□□□□□ -0.16
GPC6-201ENST00000377047 SPATA31D1Q6ZQQ2 1576 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 TIMM44O43615 452 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 CAND2O75155 1236 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 CABYRO75952 493 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 ITGB6P18564 788 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 BDNFP23560 247 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 MAGEA9P43362 315 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 CDH8P55286 799 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 CELF3Q5SZQ8 465 aaKnown RBP14.03□□□□□ -0.16
GPC6-201ENST00000377047 ZNF333Q96JL9 665 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 ZBTB45Q96K62 511 aaPredicted RBP14.03□□□□□ -0.16
GPC6-201ENST00000377047 ASB7Q9H672 318 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 FBXO10Q9UK96 956 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 IQGAP1P46940 1657 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 GUCA1CO95843 209 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 ACTN3Q08043 901 aaPredicted RBP14.03□□□□□ -0.16
GPC6-201ENST00000377047 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.03□□□□□ -0.16
GPC6-201ENST00000377047 ERP27Q96DN0 273 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 OSGEPQ9NPF4 335 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 MRGBPQ9NV56 204 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 LOC100653049A0A140TA62 436 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 KRT34O76011 436 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 NTRK3Q16288 839 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 PGS1Q32NB8 556 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 ZNF571Q7Z3V5 609 aaPredicted RBP14.03□□□□□ -0.16
GPC6-201ENST00000377047 TMEM199Q8N511 208 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 GAD1Q99259 594 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 THUMPD3Q9BV44 507 aaKnown RBP14.03□□□□□ -0.16
GPC6-201ENST00000377047 ILKAPQ9H0C8 392 aaPredicted RBP14.03□□□□□ -0.16
GPC6-201ENST00000377047 SPG21Q9NZD8 308 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 MROH7Q68CQ1 1323 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 TRIM66O15016 1216 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 MLH1P40692 756 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 ACOX1Q15067 660 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 TRMT11Q7Z4G4 463 aaKnown RBP14.03□□□□□ -0.16
GPC6-201ENST00000377047 ARHGEF19Q8IW93 802 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 SERPINB11Q96P15 392 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 MYCBPQ99417 103 aaPredicted RBP14.03□□□□□ -0.16
GPC6-201ENST00000377047 MSCO60682 206 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 UBA1P22314 1058 aaKnown RBP14.03□□□□□ -0.16
GPC6-201ENST00000377047 TUFMP49411 452 aaKnown RBP14.03□□□□□ -0.16
GPC6-201ENST00000377047 CASP7P55210 303 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 E2F4Q16254 413 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 NFIL3Q16649 462 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 AASDHQ4L235 1098 aaPredicted RBP14.03□□□□□ -0.16
GPC6-201ENST00000377047 MMGT1Q8N4V1 131 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 SPIRE2Q8WWL2 714 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 KCNB2Q92953 911 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 MRPL17Q9NRX2 175 aaKnown RBP14.03□□□□□ -0.16
GPC6-201ENST00000377047 UMODL1Q5DID0 1318 aa14.03□□□□□ -0.16
GPC6-201ENST00000377047 RECQL4O94761 1208 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 CCL23P55773 120 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 MYBPC2Q14324 1141 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 C11orf63Q6NUN7 778 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 OTOAQ7RTW8 1153 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 RPAINQ86UA6 219 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 LRRC6Q86X45 466 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 SCUBE3Q8IX30 993 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 TMCO5AQ8N6Q1 288 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 EME1Q96AY2 570 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 VIPAS39Q9H9C1 493 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 NCKAP1Q9Y2A7 1128 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 DUSP10Q9Y6W6 482 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 DISP2A7MBM2 1401 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 FKTNO75072 461 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 ALDH6A1Q02252 535 aaKnown RBP14.02□□□□□ -0.16
GPC6-201ENST00000377047 EXD1Q8NHP7 514 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 CASKIN2Q8WXE0 1202 aa14.02□□□□□ -0.16
GPC6-201ENST00000377047 SPATS2LQ9NUQ6 558 aaKnown RBP14.02□□□□□ -0.16
GPC6-201ENST00000377047 STAU1O95793 577 aaKnown RBP14.02□□□□□ -0.17
GPC6-201ENST00000377047 USP17L7P0C7H9 530 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 HALP42357 657 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 GRAMD4Q6IC98 578 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 RGMBQ6NW40 437 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 MED8Q96G25 268 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 NDUFB5O43674 189 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 CHMP1BQ7LBR1 199 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 DNAAF5Q86Y56 855 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 OSBPL1AQ9BXW6 950 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 MYO1CO00159 1063 aa14.02□□□□□ -0.17
GPC6-201ENST00000377047 SERPINF2P08697 491 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms