RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 IRGCQ6NXR0 463 aa13.72□□□□□ -0.21
ACTN1-202ENST00000376839 ZNF534Q76KX8 674 aa13.72□□□□□ -0.21
ACTN1-202ENST00000376839 NUDCD3Q8IVD9 361 aa13.72□□□□□ -0.21
ACTN1-202ENST00000376839 GPR20Q99678 358 aa13.72□□□□□ -0.21
ACTN1-202ENST00000376839 KLC2Q9H0B6 622 aa13.72□□□□□ -0.21
ACTN1-202ENST00000376839 PCDH18Q9HCL0 1135 aa13.72□□□□□ -0.21
ACTN1-202ENST00000376839 MAD1L1Q9Y6D9 718 aa13.72□□□□□ -0.21
ACTN1-202ENST00000376839 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.21
ACTN1-202ENST00000376839 APOL1O14791 398 aa13.71□□□□□ -0.21
ACTN1-202ENST00000376839 STAG3L1P0CL83 205 aa13.71□□□□□ -0.21
ACTN1-202ENST00000376839 RAP1GDS1P52306 607 aa13.71□□□□□ -0.21
ACTN1-202ENST00000376839 NDST1P52848 882 aa13.71□□□□□ -0.21
ACTN1-202ENST00000376839 IRX1P78414 480 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-202ENST00000376839 LBRQ14739 615 aaKnown RBP13.71□□□□□ -0.21
ACTN1-202ENST00000376839 C12orf29Q8N999 325 aa13.71□□□□□ -0.21
ACTN1-202ENST00000376839 SMC1BQ8NDV3 1235 aa13.71□□□□□ -0.21
ACTN1-202ENST00000376839 PPP1R16BQ96T49 567 aa13.71□□□□□ -0.21
ACTN1-202ENST00000376839 TSPAN16Q9UKR8 245 aa13.71□□□□□ -0.21
ACTN1-202ENST00000376839 IL18RAPO95256 599 aa13.71□□□□□ -0.22
ACTN1-202ENST00000376839 METTL18O95568 372 aa13.71□□□□□ -0.22
ACTN1-202ENST00000376839 PFKMP08237 780 aa13.71□□□□□ -0.22
ACTN1-202ENST00000376839 VDRP11473 427 aa13.71□□□□□ -0.22
ACTN1-202ENST00000376839 GRIA1P42261 906 aa13.71□□□□□ -0.22
ACTN1-202ENST00000376839 ALDH18A1P54886 795 aaKnown RBP13.71□□□□□ -0.22
ACTN1-202ENST00000376839 IRX4P78413 519 aa13.71□□□□□ -0.22
ACTN1-202ENST00000376839 AP1B1Q10567 949 aa13.71□□□□□ -0.22
ACTN1-202ENST00000376839 ATG16L1Q676U5 607 aa13.71□□□□□ -0.22
ACTN1-202ENST00000376839 NDUFAF2Q8N183 169 aa13.71□□□□□ -0.22
ACTN1-202ENST00000376839 CFAP61Q8NHU2 1237 aa13.71□□□□□ -0.22
ACTN1-202ENST00000376839 KLRG1Q96E93 195 aa13.71□□□□□ -0.22
ACTN1-202ENST00000376839 EBF4Q9BQW3 602 aa13.71□□□□□ -0.22
ACTN1-202ENST00000376839 SNRNP25Q9BV90 132 aaKnown RBP13.71□□□□□ -0.22
ACTN1-202ENST00000376839 PLA2G4CQ9UP65 541 aa13.71□□□□□ -0.22
ACTN1-202ENST00000376839 HBS1LQ9Y450 684 aaKnown RBP13.71□□□□□ -0.22
ACTN1-202ENST00000376839 TRDMT1O14717 391 aaKnown RBP13.7□□□□□ -0.22
ACTN1-202ENST00000376839 PPP1R12AO14974 1030 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-202ENST00000376839 CBLBQ13191 982 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 TMPRSS6Q8IU80 811 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 PHC3Q8NDX5 983 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 SHKBP1Q8TBC3 707 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 FAM172AQ8WUF8 416 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 PANX3Q96QZ0 392 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 TNFSF13BQ9Y275 285 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 BCLAF3A2AJT9 711 aaKnown RBP13.7□□□□□ -0.22
ACTN1-202ENST00000376839 PRR5-ARHGAP8B1AHC4 643 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 NFKBIEO00221 500 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 MAGEC1O60732 1142 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 BPGMP07738 259 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 SKIP12755 728 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 TFE3P19532 575 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-202ENST00000376839 RPS12P25398 132 aaKnown RBP13.7□□□□□ -0.22
ACTN1-202ENST00000376839 MAGEA6P43360 314 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 ARHGAP8P85298 464 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 UBAP2LQ14157 1087 aaKnown RBP13.7□□□□□ -0.22
ACTN1-202ENST00000376839 PPP6R3Q5H9R7 873 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-202ENST00000376839 LGSNQ5TDP6 509 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 SLC9A4Q6AI14 798 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 LBX2Q6XYB7 198 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 RIPOR1Q6ZS17 1223 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 ILDR2Q71H61 639 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 NCAPG2Q86XI2 1143 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 TRIM42Q8IWZ5 723 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 UNC5BQ8IZJ1 945 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 HPDLQ96IR7 371 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 SIGLEC10Q96LC7 697 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 MAGEB5Q9BZ81 275 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 WWP1Q9H0M0 922 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 PIDD1Q9HB75 910 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 GBA2Q9HCG7 927 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-202ENST00000376839 MKS1Q9NXB0 559 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 SLC17A6Q9P2U8 582 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 NR2E3Q9Y5X4 410 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 SSC5DA1L4H1 1573 aa13.7□□□□□ -0.22
ACTN1-202ENST00000376839 FAM159BA6NKW6 160 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 A8MXQ7 604 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 NOP56O00567 594 aaKnown RBP13.69□□□□□ -0.22
ACTN1-202ENST00000376839 GAS2O43903 313 aaKnown RBP13.69□□□□□ -0.22
ACTN1-202ENST00000376839 SNNO75324 88 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-202ENST00000376839 NPTXRO95502 500 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 TGM2P21980 687 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 MAGEA3P43357 314 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 OR52E8Q6IFG1 317 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 EFCAB12Q6NXP0 572 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 CRLF3Q8IUI8 442 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 MAP7D3Q8IWC1 876 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 SCUBE1Q8IWY4 988 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 ADGRF2Q8IZF7 708 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 ARHGAP24Q8N264 748 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 SPDYE1Q8NFV5 336 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-202ENST00000376839 THTPAQ9BU02 230 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 CCDC106Q9BWC9 280 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 FRMD8Q9BZ67 464 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-202ENST00000376839 ZNF212Q9UDV6 495 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 TAGLN3Q9UI15 199 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 PCNTO95613 3336 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 MEI4A8MW99 385 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 F5H423 210 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-202ENST00000376839 KRT38O76015 456 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 GBE1Q04446 702 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 PDK2Q15119 407 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms