RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 TAF1BQ53T94 588 aaPredicted RBP12.09□□□□□ -0.47
DDR1-227ENST00000376570 PLEKHA7Q6IQ23 1121 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 TRMT10BQ6PF06 316 aaKnown RBP12.09□□□□□ -0.47
DDR1-227ENST00000376570 LMNTD2Q8IXW0 634 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 KATNAL2Q8IYT4 538 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 CCDC185Q8N715 623 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 NPLOC4Q8TAT6 608 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 AGAP11Q8TF27 550 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 SEPT5Q99719 369 aaPredicted RBP12.09□□□□□ -0.47
DDR1-227ENST00000376570 CYP4F12Q9HCS2 524 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 SLC39A10Q9ULF5 831 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 ARL2BPQ9Y2Y0 163 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 COQ4Q9Y3A0 265 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 NFS1Q9Y697 457 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 EME2A4GXA9 379 aaPredicted RBP12.09□□□□□ -0.47
DDR1-227ENST00000376570 TRDMT1O14717 391 aaKnown RBP12.09□□□□□ -0.47
DDR1-227ENST00000376570 SERPINB6P35237 376 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 CDKN2BP42772 138 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 PLK1P53350 603 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 ELF3P78545 371 aaPredicted RBP12.09□□□□□ -0.47
DDR1-227ENST00000376570 TNS4Q8IZW8 715 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 YY1AP1Q9H869 796 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 AVENQ9NQS1 362 aaPredicted RBP12.09□□□□□ -0.47
DDR1-227ENST00000376570 KIAA1551Q9HCM1 1747 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 H3BRJ5 948 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 GJA5P36382 358 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 SNRPFP62306 86 aaKnown RBP12.09□□□□□ -0.47
DDR1-227ENST00000376570 CCDC125Q86Z20 511 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 MSL3Q8N5Y2 521 aaKnown RBP12.09□□□□□ -0.47
DDR1-227ENST00000376570 KCTD17Q8N5Z5 321 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 ATP2A3Q93084 1043 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 SERPINB12Q96P63 405 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 PLEKHA5Q9HAU0 1116 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.09□□□□□ -0.47
DDR1-227ENST00000376570 USH1CQ9Y6N9 552 aa12.09□□□□□ -0.47
DDR1-227ENST00000376570 FAM237BA0A1B0GVD1 139 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 IQCA1LA6NCM1 817 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 TSPAN1O60635 241 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 C22orf31O95567 290 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 CYP1A1P04798 512 aaPredicted RBP12.08□□□□□ -0.48
DDR1-227ENST00000376570 CPB1P15086 417 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 FOXN2P32314 431 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 MSX2P35548 267 aaPredicted RBP12.08□□□□□ -0.48
DDR1-227ENST00000376570 NME5P56597 212 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 PEX6Q13608 980 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 FBXO48Q5FWF7 155 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 CMC1Q7Z7K0 106 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 PRPF39Q86UA1 669 aaKnown RBP12.08□□□□□ -0.48
DDR1-227ENST00000376570 MPP5Q8N3R9 675 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 COLGALT1Q8NBJ5 622 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 CDKL2Q92772 493 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 NUDCD1Q96RS6 583 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 PARK7Q99497 189 aaKnown RBP12.08□□□□□ -0.48
DDR1-227ENST00000376570 CAB39LQ9H9S4 337 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 SFMBT1Q9UHJ3 866 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 TNFSF13BQ9Y275 285 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 SIGLEC16A6NMB1 481 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 XPOTO43592 962 aaKnown RBP12.08□□□□□ -0.48
DDR1-227ENST00000376570 LYPLA1O75608 230 aaPredicted RBP12.08□□□□□ -0.48
DDR1-227ENST00000376570 HAUS5O94927 633 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 TRUB2O95900 331 aaKnown RBP12.08□□□□□ -0.48
DDR1-227ENST00000376570 TSPAN8P19075 237 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 PSMB4P28070 264 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 CD52P31358 61 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 RASSF2P50749 326 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 SNX16P57768 344 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 ZRSR2Q15696 482 aaKnown RBP12.08□□□□□ -0.48
DDR1-227ENST00000376570 HSP90AA5PQ58FG0 334 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 ZNF484Q5JVG2 852 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 HFE2Q6ZVN8 426 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 PHF13Q86YI8 300 aaPredicted RBP12.08□□□□□ -0.48
DDR1-227ENST00000376570 MREGQ8N565 214 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 CPT1BQ92523 772 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 FBXL18Q96ME1 805 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 PEBP4Q96S96 227 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 STRA6Q9BX79 667 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 MAN1C1Q9NR34 630 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 AAASQ9NRG9 546 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 ANKRD12Q6UB98 2062 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 STBD1O95210 358 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 MYL2P10916 166 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 AP3M2P53677 418 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 ZNF252P-AS1Q0IIN9 211 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 LAYNQ6UX15 382 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 NLRP9Q7RTR0 991 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 TTC30AQ86WT1 665 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 IGDCC3Q8IVU1 814 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 ALLCQ8N6M5 410 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 KHSRPQ92945 711 aaKnown RBP eCLIP12.08□□□□□ -0.48
DDR1-227ENST00000376570 MARK4Q96L34 752 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 TMEM134Q9H6X4 195 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 SLC12A6Q9UHW9 1150 aa12.08□□□□□ -0.48
DDR1-227ENST00000376570 C17orf102A2RUQ5 167 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 FAM200BP0CF97 657 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 SERPINB3P29508 390 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 MAXP61244 160 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 PLIN5Q00G26 463 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 CAV1Q03135 178 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 ARHGAP1Q07960 439 aa12.07□□□□□ -0.48
DDR1-227ENST00000376570 PPM1JQ5JR12 505 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms