RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 C16orf46Q6P387 395 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 BBS12Q6ZW61 710 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 RSPH3Q86UC2 560 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 SLC26A11Q86WA9 606 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 TMEM130Q8N3G9 435 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 FLCNQ8NFG4 579 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 SYTL5Q8TDW5 730 aaPredicted RBP11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 CNTN6Q9UQ52 1028 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 RGPD3A6NKT7 1758 aaPredicted RBP11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 RGPD4Q7Z3J3 1758 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 MYOCOSA0A1B0GUC4 107 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 KLRG2A4D1S0 409 aaPredicted RBP11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 STBD1O95210 358 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 ZNF132P52740 706 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 MROH9Q5TGP6 573 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 KYAT3Q6YP21 454 aaKnown RBP11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 SPATA18Q8TC71 538 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 ANKEF1Q9NU02 776 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 GALNT8Q9NY28 637 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 ARHGAP28Q9P2N2 729 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 SOX13Q9UN79 622 aa11.92□□□□□ -0.5
TM9SF2-201ENST00000376387 WDR64B1ANS9 1081 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 SNNO75324 88 aaPredicted RBP11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 PROCP04070 461 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 SERPINA6P08185 405 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 GMPRP36959 345 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 YWHAZP63104 245 aaKnown RBP11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 ORC1Q13415 861 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 GRM2Q14416 872 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 KCNJ11Q14654 390 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 MYBPC3Q14896 1274 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 PDK3Q15120 406 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 ACBD5Q5T8D3 534 aaPredicted RBP11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 DPY19L2Q6NUT2 758 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 DENND1BQ6P3S1 775 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 TRMT10BQ6PF06 316 aaKnown RBP11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 SCARA5Q6ZMJ2 495 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 POLNQ7Z5Q5 900 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 HPS6Q86YV9 775 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 CRLF3Q8IUI8 442 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 GCNAQ96QF7 691 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 CALN1Q9BXU9 219 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 KLHL4Q9C0H6 718 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 POLR3FQ9H1D9 316 aaPredicted RBP11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 RAVER2Q9HCJ3 691 aaKnown RBP11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 TBC1D22BQ9NU19 505 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 ZDHHC7Q9NXF8 308 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 SLC17A6Q9P2U8 582 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 DNAJB4Q9UDY4 337 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 TMEM98Q9Y2Y6 226 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 ANKRD31Q8N7Z5 1873 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 FKBP6O75344 327 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 CALB1P05937 261 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 SMIM18P0DKX4 95 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 GK3PQ14409 553 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 PGM5Q15124 567 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 TRIP10Q15642 601 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 SMAD1Q15797 465 aaKnown RBP11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 MMEL1Q495T6 779 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 VWA5B1Q5TIE3 1220 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 PAOXQ6QHF9 649 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 UGT2A3Q6UWM9 527 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 NEK10Q6ZWH5 1172 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 MAVSQ7Z434 540 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 WDR75Q8IWA0 830 aaKnown RBP11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 TMEM143Q96AN5 459 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 TTLL13PA6NNM8 815 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 VILLO15195 856 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 TOM1L1O75674 476 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 ASLP04424 464 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 CAP2P40123 477 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 HALP42357 657 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 PTPN20Q4JDL3 420 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 SH3PXD2AQ5TCZ1 1133 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 ATG16L1Q676U5 607 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 DARS2Q6PI48 645 aaKnown RBP11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 ADGRF2Q8IZF7 708 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 KCTD6Q8NC69 237 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 FAF2Q96CS3 445 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 HIC2Q96JB3 615 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 OLFM3Q96PB7 478 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 MPHOSPH6Q99547 160 aaKnown RBP11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 IL1RAPL1Q9NZN1 696 aa11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 SEPT9Q9UHD8 586 aaPredicted RBP11.91□□□□□ -0.5
TM9SF2-201ENST00000376387 LOC100653049A0A140TA62 436 aa11.9□□□□□ -0.5
TM9SF2-201ENST00000376387 CAPN8A6NHC0 703 aa11.9□□□□□ -0.5
TM9SF2-201ENST00000376387 KRT34O76011 436 aa11.9□□□□□ -0.5
TM9SF2-201ENST00000376387 ICAM1P05362 532 aa11.9□□□□□ -0.5
TM9SF2-201ENST00000376387 BPGMP07738 259 aa11.9□□□□□ -0.5
TM9SF2-201ENST00000376387 SNRPAP09012 282 aaKnown RBP11.9□□□□□ -0.5
TM9SF2-201ENST00000376387 RAG1P15918 1043 aa11.9□□□□□ -0.5
TM9SF2-201ENST00000376387 RPS6P62753 249 aaKnown RBP11.9□□□□□ -0.5
TM9SF2-201ENST00000376387 GPR162Q16538 588 aa11.9□□□□□ -0.5
TM9SF2-201ENST00000376387 SWSAP1Q6NVH7 229 aa11.9□□□□□ -0.5
TM9SF2-201ENST00000376387 KRT27Q7Z3Y8 459 aa11.9□□□□□ -0.5
TM9SF2-201ENST00000376387 NDUFAF2Q8N183 169 aa11.9□□□□□ -0.5
TM9SF2-201ENST00000376387 TTLL6Q8N841 843 aa11.9□□□□□ -0.5
TM9SF2-201ENST00000376387 DTNBP1Q96EV8 351 aa11.9□□□□□ -0.5
TM9SF2-201ENST00000376387 TARS2Q9BW92 718 aaKnown RBP11.9□□□□□ -0.5
TM9SF2-201ENST00000376387 FAM117AQ9C073 453 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms