RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 TRIP10Q15642 601 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 SGO1Q5FBB7 561 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 YY1AP1Q9H869 796 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 KANSL3Q9P2N6 904 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 SLIT3O75094 1523 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 ASTN2O75129 1339 aaPredicted RBP14.05□□□□□ -0.16
C9orf47-203ENST00000375851 PLA2G6O60733 806 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 SKAP2O75563 359 aaPredicted RBP14.05□□□□□ -0.16
C9orf47-203ENST00000375851 CSE1LP55060 971 aaKnown RBP14.05□□□□□ -0.16
C9orf47-203ENST00000375851 POLD3Q15054 466 aaPredicted RBP14.05□□□□□ -0.16
C9orf47-203ENST00000375851 ZACNQ401N2 412 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 TRPM4Q8TD43 1214 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 SOCS4Q8WXH5 440 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 USP13Q92995 863 aaPredicted RBP14.05□□□□□ -0.16
C9orf47-203ENST00000375851 RIC8BQ9NVN3 520 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 KIF17Q9P2E2 1029 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 VAV3Q9UKW4 847 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 RUVBL2Q9Y230 463 aaKnown RBP14.05□□□□□ -0.16
C9orf47-203ENST00000375851 ACOT9Q9Y305 439 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 MYPNQ86TC9 1320 aa14.05□□□□□ -0.16
C9orf47-203ENST00000375851 SRP72O76094 671 aaKnown RBP14.04□□□□□ -0.16
C9orf47-203ENST00000375851 SOX11P35716 441 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 UGCGQ16739 394 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 AADACL2Q6P093 401 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 FOXR2Q6PJQ5 311 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 MOB2Q70IA6 237 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 KATNAL2Q8IYT4 538 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 ZSWIM2Q8NEG5 633 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 HTR3CQ8WXA8 447 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 TRPC5OSA6NMA1 111 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 AKAP10O43572 662 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 CNTFP26441 200 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 COPAP53621 1224 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 MED21Q13503 144 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 ADCK2Q7Z695 626 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 EME1Q96AY2 570 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 CDT1Q9H211 546 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 VANGL2Q9ULK5 521 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 URODP06132 367 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 ITIH4Q14624 930 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 CNGA2Q16280 664 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 KCNT2Q6UVM3 1135 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 EFL1Q7Z2Z2 1120 aaKnown RBP14.04□□□□□ -0.16
C9orf47-203ENST00000375851 OR5B17Q8NGF7 314 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 KAT2BQ92831 832 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 SMARCD1Q96GM5 515 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 WNK4Q96J92 1243 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 DRG1Q9Y295 367 aaKnown RBP14.04□□□□□ -0.16
C9orf47-203ENST00000375851 NFAT5O94916 1531 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 SIGLEC1Q9BZZ2 1709 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 HEATR9A2RTY3 570 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 APOC4-APOC2K7ER74 178 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 APOC2P02655 101 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 NFICP08651 508 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 SKIV2LQ15477 1246 aaKnown RBP14.04□□□□□ -0.16
C9orf47-203ENST00000375851 SUGP1Q8IWZ8 645 aaKnown RBP14.04□□□□□ -0.16
C9orf47-203ENST00000375851 FAM136AQ96C01 138 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 FHDC1Q9C0D6 1143 aaPredicted RBP14.04□□□□□ -0.16
C9orf47-203ENST00000375851 IL1RL2Q9HB29 575 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 DMAP1Q9NPF5 467 aaPredicted RBP14.04□□□□□ -0.16
C9orf47-203ENST00000375851 NINJ2Q9NZG7 142 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 HES2Q9Y543 173 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 PCDHB5Q9Y5E4 795 aa14.04□□□□□ -0.16
C9orf47-203ENST00000375851 SYNDIG1LA6NDD5 238 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 CLASP2O75122 1294 aaKnown RBP14.03□□□□□ -0.16
C9orf47-203ENST00000375851 MAMLD1Q13495 774 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 TTLL9Q3SXZ7 439 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 ARHGAP15Q53QZ3 475 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 MARC1Q5VT66 337 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 ILDR2Q71H61 639 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 IRF2BP2Q7Z5L9 587 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 KLRG1Q96E93 195 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 SENP8Q96LD8 212 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 INPP4AQ96PE3 977 aaPredicted RBP14.03□□□□□ -0.16
C9orf47-203ENST00000375851 STX18Q9P2W9 335 aaKnown RBP14.03□□□□□ -0.16
C9orf47-203ENST00000375851 SLC4A7Q9Y6M7 1214 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 RNF225M0QZC1 329 aaPredicted RBP14.03□□□□□ -0.16
C9orf47-203ENST00000375851 CCDC130P13994 396 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 HDAC4P56524 1084 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 IFI35P80217 286 aaPredicted RBP14.03□□□□□ -0.16
C9orf47-203ENST00000375851 CYTH1Q15438 398 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 GJC2Q5T442 439 aaPredicted RBP14.03□□□□□ -0.16
C9orf47-203ENST00000375851 SNX31Q8N9S9 440 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 TSEN2Q8NCE0 465 aaKnown RBP14.03□□□□□ -0.16
C9orf47-203ENST00000375851 PGLYRP2Q96PD5 576 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 COG4Q9H9E3 785 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 HAO1Q9UJM8 370 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 NRCAMQ92823 1304 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 LYPLA2O95372 231 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 SERPIND1P05546 499 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 RHOCP08134 193 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 FMO1Q01740 532 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 CEP70Q8NHQ1 597 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 LZICQ8WZA0 190 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 FBXO44Q9H4M3 255 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 GID8Q9NWU2 228 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 VPS28Q9UK41 221 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 TRPV2Q9Y5S1 764 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 ROBO3Q96MS0 1386 aa14.03□□□□□ -0.16
C9orf47-203ENST00000375851 VPS26AO75436 327 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms