RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CIB2O75838 187 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 TRUB2O95900 331 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 IL1BP01584 269 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 ASPAP45381 313 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 ACTR3P61158 418 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 YWHAEP62258 255 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 CAPSQ13938 189 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 MROH9Q5TGP6 573 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 MTHFD1LQ6UB35 978 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 FASTKD5Q7L8L6 764 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 XYLT1Q86Y38 959 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 GSTCDQ8NEC7 633 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 BRI3BPQ8WY22 251 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 TRAPPC9Q96Q05 1148 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 MMP19Q99542 508 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 ECSITQ9BQ95 431 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 CCDC106Q9BWC9 280 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 DHX33Q9H6R0 707 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 PCMTD2Q9NV79 361 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 NDE1Q9NXR1 346 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 DDX43Q9NXZ2 648 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 ANKRD33BA6NCL7 494 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 MAFGO15525 162 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 KRT37O76014 449 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 POLR2BP30876 1174 aaKnown RBP14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 CDH6P55285 790 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 ZNF699Q32M78 642 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 TEX44Q53QW1 395 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 WDR49Q8IV35 697 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 NSUN6Q8TEA1 469 aaKnown RBP14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 ZFAND2BQ8WV99 257 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 SLC7A3Q8WY07 619 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 MTBPQ96DY7 904 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 SIRPGQ9P1W8 387 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 BTBD19C9JJ37 291 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 KCNN4O15554 427 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 FAM189A1O60320 539 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 SORBS2O94875 1100 aaKnown RBP14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 OATP04181 439 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 C6orf222P0C671 652 aaPredicted RBP14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 CSH1P0DML2 217 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 CSH2P0DML3 217 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 SLC25A3Q00325 362 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 DSG1Q02413 1049 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 DUOXA2Q1HG44 320 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 TRMT5Q32P41 509 aaKnown RBP14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 ATG16L1Q676U5 607 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 TRMT10BQ6PF06 316 aaKnown RBP14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 RAPH1Q70E73 1250 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 CAND1Q86VP6 1230 aaKnown RBP14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 CDR2LQ86X02 465 aaPredicted RBP14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 ZNF668Q96K58 619 aaPredicted RBP14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 PTPN18Q99952 460 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 WWP1Q9H0M0 922 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 USP29Q9HBJ7 922 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 POPDC2Q9HBU9 364 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 ZNF302Q9NR11 478 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 PPME1Q9Y570 386 aa14.64□□□□□ -0.07
CLCNKA-202ENST00000375692 CCL15-CCL14A0A0B4J2E2 113 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 RTN3O95197 1032 aaPredicted RBP14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 PGK2P07205 417 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 APRTP07741 180 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 STIP1P31948 543 aaKnown RBP14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 HUNKP57058 714 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 AP2B1P63010 937 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 CDC16Q13042 620 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 NOMO1Q15155 1222 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 CCL15Q16663 113 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 WDR78Q5VTH9 848 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 XRRA1Q6P2D8 792 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 DPH6Q7L8W6 267 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 RIOX2Q8IUF8 465 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 CRLF3Q8IUI8 442 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 NDUFAF2Q8N183 169 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 PYDC1Q8WXC3 89 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 XYLT2Q9H1B5 865 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 EBF3Q9H4W6 596 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 SMYD3Q9H7B4 428 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 HBS1LQ9Y450 684 aaKnown RBP14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 HEY1Q9Y5J3 304 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 HMX2A2RU54 273 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 KLHL33A6NCF5 533 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 PDHXO00330 501 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 RNASEH1O60930 286 aaKnown RBP14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 LYPLA1O75608 230 aaPredicted RBP14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 RNF8O76064 485 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 ABCD1P33897 745 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 PDE1BQ01064 536 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 C6orf163Q5TEZ5 329 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 POU5F2Q8N7G0 328 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 RNF217Q8TC41 542 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 USP6NLQ92738 828 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 NR1H4Q96RI1 486 aaPredicted RBP14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 APOL6Q9BWW8 343 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 SHCBP1LQ9BZQ2 653 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 PDP2Q9P2J9 529 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 HMGXB4Q9UGU5 601 aa14.63□□□□□ -0.07
CLCNKA-202ENST00000375692 A0A088AWK7 358 aa14.62□□□□□ -0.07
CLCNKA-202ENST00000375692 ARHGAP42A6NI28 874 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms