RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 DNMT3LQ9UJW3 386 aa16.38■□□□□ 0.21
SDHB-201ENST00000375499 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.38■□□□□ 0.21
SDHB-201ENST00000375499 CNOT1A5YKK6 2376 aaKnown RBP16.38■□□□□ 0.21
SDHB-201ENST00000375499 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.37■□□□□ 0.21
SDHB-201ENST00000375499 M0QYV0 167 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 PIK3R2O00459 728 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 TRIM24O15164 1050 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 STC2O76061 302 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 FGFR1OPO95684 399 aaKnown RBP16.37■□□□□ 0.21
SDHB-201ENST00000375499 SLC9A1P19634 815 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 RGS7P49802 495 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 SEC13P55735 322 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 KDSRQ06136 332 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 CETN1Q12798 172 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 SIM2Q14190 667 aaPredicted RBP16.37■□□□□ 0.21
SDHB-201ENST00000375499 PM20D1Q6GTS8 502 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 TRIM65Q6PJ69 517 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 LCLAT1Q6UWP7 414 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 Q6ZNB5 142 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 HTR3DQ70Z44 454 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 TMEM25Q86YD3 366 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 MIB1Q86YT6 1006 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 ETFBKMTQ8IXQ9 262 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 HHIPQ96QV1 700 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 CLIC5Q9NZA1 410 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 HESX1Q9UBX0 185 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 RASAL2Q9UJF2 1139 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 CNTN6Q9UQ52 1028 aa16.37■□□□□ 0.21
SDHB-201ENST00000375499 CHD8Q9HCK8 2581 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 CACNA1GO43497 2377 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 ZBED1O96006 694 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 ADH1CP00326 375 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 KLKB1P03952 638 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 SETSIPP0DME0 302 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 HOXA6P31267 233 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 PSEN1P49768 467 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 LIMK1P53667 647 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 YWHAGP61981 247 aaKnown RBP eCLIP16.36■□□□□ 0.21
SDHB-201ENST00000375499 EFEMP1Q12805 493 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 PMF1Q6P1K2 205 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 PRR23CQ6ZRP0 262 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 ZNF276Q8N554 614 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 NAT16Q8N8M0 369 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 CLEC4CQ8WTT0 213 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 SLC35F5Q8WV83 523 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 OTUB2Q96DC9 234 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 SIX2Q9NPC8 291 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 UBE2TQ9NPD8 197 aaPredicted RBP16.36■□□□□ 0.21
SDHB-201ENST00000375499 ZDHHC4Q9NPG8 344 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 SPHK2Q9NRA0 654 aa16.36■□□□□ 0.21
SDHB-201ENST00000375499 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.36■□□□□ 0.21
SDHB-201ENST00000375499 YJEFN3A6XGL0 299 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 BECN2A8MW95 431 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 E7ENQ6 273 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 HOXC11O43248 304 aaPredicted RBP16.35■□□□□ 0.21
SDHB-201ENST00000375499 HRO43593 1189 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 HMBSP08397 361 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 RALAP11233 206 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 LCP1P13796 627 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 MTIF2P46199 727 aaKnown RBP16.35■□□□□ 0.21
SDHB-201ENST00000375499 CNGA2Q16280 664 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 LPAL2Q16609 132 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 FBXO43Q4G163 708 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 MIIPQ5JXC2 388 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 DPY19L2P1Q6NXN4 242 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 PRR23BQ6ZRT6 265 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 RBM43Q6ZSC3 357 aaKnown RBP16.35■□□□□ 0.21
SDHB-201ENST00000375499 TPGS1Q6ZTW0 290 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 LONP2Q86WA8 852 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 USP33Q8TEY7 942 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 KCTD13Q8WZ19 329 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 THAP9Q9H5L6 903 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 LRRC4Q9HBW1 653 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 ANGPTL2Q9UKU9 493 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 KIAA1257Q9ULG3 409 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 SPAG17Q6Q759 2223 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 SDK1Q7Z5N4 2213 aa16.35■□□□□ 0.21
SDHB-201ENST00000375499 KAT7O95251 611 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 KRT5P13647 590 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 HNRNPLP14866 589 aaKnown RBP eCLIP16.34■□□□□ 0.21
SDHB-201ENST00000375499 PON1P27169 355 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 EIF2DP41214 584 aaKnown RBP16.34■□□□□ 0.21
SDHB-201ENST00000375499 SLC8A3P57103 927 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 DAOAP59103 153 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 SHC2P98077 582 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 GAD2Q05329 585 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 MAN2A1Q16706 1144 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 ANO4Q32M45 955 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 C2orf27AQ580R0 203 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 EMC10Q5UCC4 262 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 EDEM1Q92611 657 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 LOXL4Q96JB6 756 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 IPO9Q96P70 1041 aaKnown RBP16.34■□□□□ 0.21
SDHB-201ENST00000375499 PNKPQ96T60 521 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 ARHGEF4Q9NR80 690 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 SAMSN1Q9NSI8 373 aaKnown RBP16.34■□□□□ 0.21
SDHB-201ENST00000375499 MARCH2Q9P0N8 246 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 HCN2Q9UL51 889 aa16.34■□□□□ 0.21
SDHB-201ENST00000375499 SLC12A8A0AV02 714 aa16.33■□□□□ 0.2
SDHB-201ENST00000375499 NEDD8-MDP1E9PL57 170 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms