RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 EPHB3P54753 998 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 GALCP54803 685 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 DUSP4Q13115 394 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PLD1Q13393 1074 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PON2Q15165 354 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ZNF569Q5MCW4 686 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 DSTYKQ6XUX3 929 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CEP68Q76N32 757 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 LONP2Q86WA8 852 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ARID3BQ8IVW6 561 aaPredicted RBP11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 FAM160A2Q8N612 972 aaPredicted RBP11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 OR6B3Q8NGW1 331 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CYFIP2Q96F07 1278 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 MSANTD3Q96H12 275 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 LRRC3BQ96PB8 259 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 MRPL45Q9BRJ2 306 aaKnown RBP11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PACSIN1Q9BY11 444 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ELOVL4Q9GZR5 314 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TAS2R14Q9NYV8 317 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 GTSE1Q9NYZ3 720 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TRIM10Q9UDY6 481 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 MAFFQ9ULX9 164 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PCDHGC3Q9UN70 934 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 SLC27A5Q9Y2P5 690 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 DUSP10Q9Y6W6 482 aa11.52□□□□□ -0.57
HLA-DQA1-202ENST00000374949 EML5Q05BV3 1969 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 MYBPHLA2RUH7 354 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 MTMR11A4FU01 709 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 A8MXQ7 604 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 OAZ2O95190 189 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PAPSS2O95340 614 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CYP1A1P04798 512 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 UNGP13051 313 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CD19P15391 556 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 WARSP23381 471 aaKnown RBP11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 BRD2P25440 801 aaKnown RBP11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CASQ1P31415 396 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 AARSP49588 968 aaKnown RBP eCLIP11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 NAP1L1P55209 391 aaKnown RBP11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CYP4F8P98187 520 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TNK2Q07912 1038 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 STILQ15468 1287 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CCDC6Q16204 474 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CNGA2Q16280 664 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 IFI16Q16666 785 aaKnown RBP11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 SGO2Q562F6 1265 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 GPR158Q5T848 1215 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 SYT10Q6XYQ8 523 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 GAREM2Q75VX8 874 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CRYBG2Q8N1P7 616 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TMEM86AQ8N2M4 240 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ATAD1Q8NBU5 361 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 KIF18AQ8NI77 898 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CTNNBL1Q8WYA6 563 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TFAP2BQ92481 460 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ZNF592Q92610 1267 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 E2F7Q96AV8 911 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 SENP8Q96LD8 212 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TWNKQ96RR1 684 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TMEM209Q96SK2 561 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 IRX2Q9BZI1 471 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ZNF518BQ9C0D4 1074 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 SMG9Q9H0W8 520 aaKnown RBP11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 LHX5Q9H2C1 402 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ATXN3LQ9H3M9 355 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 C8orf33Q9H7E9 229 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 DNAI1Q9UI46 699 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 L1RE1Q9UN81 338 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PAXBP1Q9Y5B6 917 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 OBSL1O75147 1896 aa11.51□□□□□ -0.57
HLA-DQA1-202ENST00000374949 A0A0A6YYK5 440 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 MACROD2A1Z1Q3 448 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 OR6C75A6NL08 312 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 DPYSL4O14531 572 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 LSM8O95777 96 aaKnown RBP11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 GABRR2P28476 465 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CNR2P34972 360 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 NSFP46459 744 aaKnown RBP11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ALDH1A3P47895 512 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 LHX1P48742 406 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PXNP49023 591 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 MLLT6P55198 1093 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 GPR17Q13304 367 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ORC1Q13415 861 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 SF3A2Q15428 464 aaKnown RBP11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 AASDHQ4L235 1098 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 DGKKQ5KSL6 1271 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 OVOS1Q6IE37 1185 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PKN3Q6P5Z2 889 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 C1orf228Q6PIY5 440 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 RALGPS2Q86X27 583 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 METTL23Q86XA0 190 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 DNAAF5Q86Y56 855 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ADGRF2Q8IZF7 708 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PDCL2Q8N4E4 241 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TMEM35BQ8NCS4 154 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 KBTBD7Q8WVZ9 684 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CPA5Q8WXQ8 436 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TRIM11Q96F44 468 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 VCPIP1Q96JH7 1222 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms