RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 APOBEC2Q9Y235 224 aaKnown RBP21.3■■□□□ 1
TMEFF1-201ENST00000374879 LYPLA1O75608 230 aaPredicted RBP21.29■■□□□ 1
TMEFF1-201ENST00000374879 NELFEP18615 380 aaKnown RBP21.29■■□□□ 1
TMEFF1-201ENST00000374879 MRPS22P82650 360 aaKnown RBP21.29■■□□□ 1
TMEFF1-201ENST00000374879 FBXO11Q86XK2 927 aa21.29■■□□□ 1
TMEFF1-201ENST00000374879 LILRA2Q8N149 483 aa21.29■■□□□ 1
TMEFF1-201ENST00000374879 CCDC127Q96BQ5 260 aa21.29■■□□□ 1
TMEFF1-201ENST00000374879 ZDHHC15Q96MV8 337 aa21.29■■□□□ 1
TMEFF1-201ENST00000374879 SENP7Q9BQF6 1050 aa21.29■■□□□ 1
TMEFF1-201ENST00000374879 IFT122Q9HBG6 1241 aa21.29■■□□□ 1
TMEFF1-201ENST00000374879 XPO7Q9UIA9 1087 aaKnown RBP21.29■■□□□ 1
TMEFF1-201ENST00000374879 RIMS3Q9UJD0 308 aa21.29■■□□□ 1
TMEFF1-201ENST00000374879 ADRB2P07550 413 aa21.29■■□□□ 1
TMEFF1-201ENST00000374879 WEE2P0C1S8 567 aa21.29■■□□□ 1
TMEFF1-201ENST00000374879 SSTR3P32745 418 aaPredicted RBP21.29■■□□□ 1
TMEFF1-201ENST00000374879 MAMLD1Q13495 774 aa21.29■■□□□ 1
TMEFF1-201ENST00000374879 PDIK1LQ8N165 341 aa21.29■■□□□ 1
TMEFF1-201ENST00000374879 XXYLT1Q8NBI6 393 aa21.29■■□□□ 1
TMEFF1-201ENST00000374879 RNF169Q8NCN4 708 aa21.29■■□□□ 1
TMEFF1-201ENST00000374879 NKD2Q969F2 451 aaPredicted RBP21.29■■□□□ 1
TMEFF1-201ENST00000374879 DCUN1D5Q9BTE7 237 aa21.29■■□□□ 1
TMEFF1-201ENST00000374879 EBF1Q9UH73 591 aa21.29■■□□□ 1
TMEFF1-201ENST00000374879 RNF11Q9Y3C5 154 aa21.29■■□□□ 1
TMEFF1-201ENST00000374879 KBTBD13C9JR72 458 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 TLR3O15455 904 aaKnown RBP21.28■■□□□ 1
TMEFF1-201ENST00000374879 GDF11O95390 407 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 L1CAMP32004 1257 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 TTC39BQ5VTQ0 682 aaPredicted RBP21.28■■□□□ 1
TMEFF1-201ENST00000374879 SPOCD1Q6ZMY3 1216 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 MON1BQ7L1V2 547 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 CPNE9Q8IYJ1 553 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 GSDMBQ8TAX9 411 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 WRAP73Q9P2S5 460 aaPredicted RBP21.28■■□□□ 1
TMEFF1-201ENST00000374879 FAM198AQ9UFP1 575 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 CFHP08603 1231 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 HOXA13P31271 388 aaPredicted RBP21.28■■□□□ 1
TMEFF1-201ENST00000374879 DSG3P32926 999 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 RPL22P35268 128 aaKnown RBP21.28■■□□□ 1
TMEFF1-201ENST00000374879 SREBF1P36956 1147 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 YWHAGP61981 247 aaKnown RBP eCLIP21.28■■□□□ 1
TMEFF1-201ENST00000374879 DCAF6Q58WW2 860 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 SLC27A3Q5K4L6 730 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 SH3BP5LQ7L8J4 393 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 WDR75Q8IWA0 830 aaKnown RBP21.28■■□□□ 1
TMEFF1-201ENST00000374879 ADCY4Q8NFM4 1077 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 TAS1R2Q8TE23 839 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 TRIM11Q96F44 468 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 NT5C1BQ96P26 610 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 DNAJC16Q9Y2G8 782 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 IVNS1ABPQ9Y6Y0 642 aa21.28■■□□□ 1
TMEFF1-201ENST00000374879 K7EPI3 171 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 OXSR1O95747 527 aaPredicted RBP21.27■■□□□ 1
TMEFF1-201ENST00000374879 PPARGP37231 505 aaPredicted RBP21.27■■□□□ 1
TMEFF1-201ENST00000374879 NDST2P52849 883 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 OGFOD2Q6N063 350 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 CTAGE3PQ8IX95 158 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 DAW1Q8N136 415 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 CENPSQ8N2Z9 138 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 GPATCH1Q9BRR8 931 aaKnown RBP21.27■■□□□ 1
TMEFF1-201ENST00000374879 NRDE2Q9H7Z3 1164 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 THAP1Q9NVV9 213 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 TRNAU1APQ9NX07 287 aaKnown RBP21.27■■□□□ 1
TMEFF1-201ENST00000374879 TMX2-CTNND1H3BSU7 103 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 BPGMP07738 259 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 PSMC3P17980 439 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 TXNRD3NBQ6F5E7 133 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 PPM1NQ8N819 430 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 CATSPER1Q8NEC5 780 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 POMGNT1Q8WZA1 660 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 CMTM5Q96DZ9 223 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 KCNK16Q96T55 309 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 TCHPQ9BT92 498 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 IGSF9Q9P2J2 1179 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 ZNRF3Q9ULT6 936 aa21.27■■□□□ 1
TMEFF1-201ENST00000374879 SIPA1L1O43166 1804 aa21.27■□□□□ 0.99
TMEFF1-201ENST00000374879 TOM1L1O75674 476 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 NDUFB10O96000 172 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 NPR1P16066 1061 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 RAB15P59190 212 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 CD300CQ08708 224 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 BMPR2Q13873 1038 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 PIWIL2Q8TC59 973 aaKnown RBP21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 CASP10Q92851 521 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 PI4K2AQ9BTU6 479 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 NUF2Q9BZD4 464 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 TRPC7Q9HCX4 862 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 TUFT1Q9NNX1 390 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 TOPORSQ9NS56 1045 aaPredicted RBP21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 ANKRD31Q8N7Z5 1873 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 RFPL1O75677 317 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 TOP3BO95985 862 aaKnown RBP21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 FOSP01100 380 aaPredicted RBP21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 MSX2P35548 267 aaPredicted RBP21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 PSMC5P62195 406 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 DYNLT1P63172 113 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 THOC7Q6I9Y2 204 aaKnown RBP21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 TMEM179Q6ZVK1 233 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 MAVSQ7Z434 540 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 SLC26A11Q86WA9 606 aa21.26■□□□□ 0.99
TMEFF1-201ENST00000374879 PHTF2Q8N3S3 785 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms