RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 DDX53Q86TM3 631 aaKnown RBP16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 FAM131BQ86XD5 332 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 JAMLQ86YT9 394 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 NUP93Q8N1F7 819 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 CCDC26Q8TAB7 109 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 SPPL2BQ8TCT7 592 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 GPR152Q8TDT2 470 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 MAIP1Q8WWC4 291 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 SLCO2A1Q92959 643 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 FAF2Q96CS3 445 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 OSER1Q9NX31 292 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 SPG21Q9NZD8 308 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 PRKAG2Q9UGJ0 569 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 FZD10Q9ULW2 581 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 STAP1Q9ULZ2 295 aa16.36■□□□□ 0.21
NIPAL3-204ENST00000374399 PLXNA4Q9HCM2 1894 aa16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 C2CD2LO14523 706 aa16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 TJP3O95049 919 aa16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 IGLV3-25P01717 112 aa16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 ATF6P18850 670 aa16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 OR1D2P34982 312 aa16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 RDXP35241 583 aaKnown RBP16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 SMARCB1Q12824 385 aa16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 IFRD2Q12894 506 aaPredicted RBP16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 SNX1Q13596 522 aa16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 DHX34Q14147 1143 aaKnown RBP16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 MAATS1Q7Z4T9 603 aa16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 PQLC3Q8N755 202 aa16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 SLC7A14Q8TBB6 771 aa16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 TMEM169Q96HH4 297 aa16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 KCTD15Q96SI1 283 aaPredicted RBP16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 SAE1Q9UBE0 346 aaPredicted RBP16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 SCML2Q9UQR0 700 aa16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 NEU2Q9Y3R4 380 aa16.35■□□□□ 0.21
NIPAL3-204ENST00000374399 CST8O60676 142 aa16.34■□□□□ 0.21
NIPAL3-204ENST00000374399 CETN2P41208 172 aa16.34■□□□□ 0.21
NIPAL3-204ENST00000374399 YWHAGP61981 247 aaKnown RBP eCLIP16.34■□□□□ 0.21
NIPAL3-204ENST00000374399 PDK2Q15119 407 aa16.34■□□□□ 0.21
NIPAL3-204ENST00000374399 DUPD1Q68J44 220 aa16.34■□□□□ 0.21
NIPAL3-204ENST00000374399 DDX42Q86XP3 938 aaKnown RBP eCLIP16.34■□□□□ 0.21
NIPAL3-204ENST00000374399 PYROXD2Q8N2H3 581 aa16.34■□□□□ 0.21
NIPAL3-204ENST00000374399 DQX1Q8TE96 717 aaKnown RBP16.34■□□□□ 0.21
NIPAL3-204ENST00000374399 AENQ8WTP8 325 aaKnown RBP16.34■□□□□ 0.21
NIPAL3-204ENST00000374399 C2orf15Q8WU43 125 aaKnown RBP16.34■□□□□ 0.21
NIPAL3-204ENST00000374399 HERVK_113Q902F9 699 aa16.34■□□□□ 0.21
NIPAL3-204ENST00000374399 CLP1Q92989 425 aaKnown RBP16.34■□□□□ 0.21
NIPAL3-204ENST00000374399 RNF157Q96PX1 679 aa16.34■□□□□ 0.21
NIPAL3-204ENST00000374399 CHD7Q9P2D1 2997 aa16.34■□□□□ 0.21
NIPAL3-204ENST00000374399 A0A1W2PQH9 124 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 FAM187AA6NFU0 413 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 CAPN9O14815 690 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 LIASO43766 372 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 LILRB3O75022 631 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 ABLIM3O94929 683 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 SEC24AO95486 1093 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 GLUD2P49448 558 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 DEUP1Q05D60 604 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 NME3Q13232 169 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 MTMR3Q13615 1198 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 DRICH1Q6PGQ1 229 aaPredicted RBP16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 TAC4Q86UU9 113 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 VSIG1Q86XK7 387 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 IFT20Q8IY31 132 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 PCDH19Q8TAB3 1148 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 SLC35B2Q8TB61 432 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 SP7Q8TDD2 431 aaPredicted RBP16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 AUTS2Q8WXX7 1259 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 HAUS1Q96CS2 278 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 SPATA17Q96L03 361 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 ERP44Q9BS26 406 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 CALN1Q9BXU9 219 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 NEUROG2Q9H2A3 272 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 ARGLU1Q9NWB6 273 aaPredicted RBP16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 DNPEPQ9ULA0 475 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 AP4E1Q9UPM8 1137 aa16.33■□□□□ 0.21
NIPAL3-204ENST00000374399 SYNJ2BP-COX16A0A087WUM0 186 aa16.33■□□□□ 0.2
NIPAL3-204ENST00000374399 LCHNA4D1U4 455 aa16.33■□□□□ 0.2
NIPAL3-204ENST00000374399 DAPK3O43293 454 aa16.33■□□□□ 0.2
NIPAL3-204ENST00000374399 PECAM1P16284 738 aaPredicted RBP16.33■□□□□ 0.2
NIPAL3-204ENST00000374399 DYNLT1P63172 113 aa16.33■□□□□ 0.2
NIPAL3-204ENST00000374399 OASLQ15646 514 aaKnown RBP16.33■□□□□ 0.2
NIPAL3-204ENST00000374399 MGAT5BQ3V5L5 792 aa16.33■□□□□ 0.2
NIPAL3-204ENST00000374399 ANKRD20A8PQ5CZ79 823 aa16.33■□□□□ 0.2
NIPAL3-204ENST00000374399 PSRC1Q6PGN9 363 aaPredicted RBP16.33■□□□□ 0.2
NIPAL3-204ENST00000374399 HERC6Q8IVU3 1022 aa16.33■□□□□ 0.2
NIPAL3-204ENST00000374399 SLC9A7Q96T83 725 aa16.33■□□□□ 0.2
NIPAL3-204ENST00000374399 SEPT5Q99719 369 aaPredicted RBP16.33■□□□□ 0.2
NIPAL3-204ENST00000374399 DHX35Q9H5Z1 703 aaKnown RBP16.33■□□□□ 0.2
NIPAL3-204ENST00000374399 RRN3Q9NYV6 651 aa16.33■□□□□ 0.2
NIPAL3-204ENST00000374399 COX16Q9P0S2 106 aa16.33■□□□□ 0.2
NIPAL3-204ENST00000374399 ZMYND8Q9ULU4 1186 aaPredicted RBP16.33■□□□□ 0.2
NIPAL3-204ENST00000374399 ZNF487B1APH4 448 aa16.32■□□□□ 0.2
NIPAL3-204ENST00000374399 DESP17661 470 aa16.32■□□□□ 0.2
NIPAL3-204ENST00000374399 MCM3P25205 808 aa16.32■□□□□ 0.2
NIPAL3-204ENST00000374399 ADRA1BP35368 520 aa16.32■□□□□ 0.2
NIPAL3-204ENST00000374399 CXCR3P49682 368 aa16.32■□□□□ 0.2
NIPAL3-204ENST00000374399 KRT81Q14533 505 aa16.32■□□□□ 0.2
NIPAL3-204ENST00000374399 ODF2Q5BJF6 829 aa16.32■□□□□ 0.2
NIPAL3-204ENST00000374399 SLC9A4Q6AI14 798 aa16.32■□□□□ 0.2
NIPAL3-204ENST00000374399 KIAA1841Q6NSI8 718 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms