RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 BBS7Q8IWZ6 715 aa12.59□□□□□ -0.39
HDAC8-201ENST00000373554 NDRG1Q92597 394 aaKnown RBP12.59□□□□□ -0.39
HDAC8-201ENST00000373554 EDEM1Q92611 657 aa12.59□□□□□ -0.39
HDAC8-201ENST00000373554 CLDN23Q96B33 292 aa12.59□□□□□ -0.39
HDAC8-201ENST00000373554 TRIM62Q9BVG3 475 aa12.59□□□□□ -0.39
HDAC8-201ENST00000373554 LHX5Q9H2C1 402 aa12.59□□□□□ -0.39
HDAC8-201ENST00000373554 LINC00597Q9H2U6 94 aa12.59□□□□□ -0.39
HDAC8-201ENST00000373554 CBX8Q9HC52 389 aa12.59□□□□□ -0.39
HDAC8-201ENST00000373554 NLRC4Q9NPP4 1024 aa12.59□□□□□ -0.39
HDAC8-201ENST00000373554 MARCH2Q9P0N8 246 aa12.59□□□□□ -0.39
HDAC8-201ENST00000373554 DLGAP2Q9P1A6 1054 aa12.59□□□□□ -0.39
HDAC8-201ENST00000373554 E5RJQ4 531 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 GOLGA6L19H0YKK7 550 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 EPHB6O15197 1021 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 GABBR2O75899 941 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 SERPINC1P01008 464 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 LTFP02788 710 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 CYP17A1P05093 508 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 CYP11B1P15538 503 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 RPL34P49207 117 aaKnown RBP12.58□□□□□ -0.4
HDAC8-201ENST00000373554 SNX16P57768 344 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 GRSF1Q12849 480 aaKnown RBP eCLIP12.58□□□□□ -0.4
HDAC8-201ENST00000373554 DHCR24Q15392 516 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 DGKKQ5KSL6 1271 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 HTR3DQ70Z44 454 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 LUZP1Q86V48 1076 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 SCUBE3Q8IX30 993 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 ADGRG2Q8IZP9 1017 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 ZNF687Q8N1G0 1237 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 C1orf131Q8NDD1 294 aaKnown RBP12.58□□□□□ -0.4
HDAC8-201ENST00000373554 PRSS33Q8NF86 280 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 IPO4Q8TEX9 1081 aaKnown RBP12.58□□□□□ -0.4
HDAC8-201ENST00000373554 CLEC4CQ8WTT0 213 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 FAM149B1Q96BN6 582 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 P2RY13Q9BPV8 354 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 IER2Q9BTL4 223 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 SLC4A5Q9BY07 1137 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 IRF2BPLQ9H1B7 796 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 SYNCQ9H7C4 482 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 LMAN1LQ9HAT1 526 aa12.58□□□□□ -0.4
HDAC8-201ENST00000373554 SPATA6Q9NWH7 488 aaPredicted RBP12.58□□□□□ -0.4
HDAC8-201ENST00000373554 MUC6Q6W4X9 2439 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 SLC12A8A0AV02 714 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 TRDMT1O14717 391 aaKnown RBP12.57□□□□□ -0.4
HDAC8-201ENST00000373554 STC2O76061 302 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 GFPT2O94808 682 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 HMBSP08397 361 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 CHRNB1P11230 501 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 ADH5P11766 374 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 SOX5P35711 763 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 STAT1P42224 750 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 JAM2P57087 298 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 TAF3Q5VWG9 929 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 CACNA2D4Q7Z3S7 1137 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 TMEM110Q86TL2 294 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 TMEM35BQ8NCS4 154 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 EPS8L1Q8TE68 723 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 CD101Q93033 1021 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 WBP2Q969T9 261 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 PLD4Q96BZ4 506 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 CHFRQ96EP1 664 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 PPP1R13BQ96KQ4 1090 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 DCLK3Q9C098 648 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 CHRDQ9H2X0 955 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 RTN4Q9NQC3 1192 aaKnown RBP12.57□□□□□ -0.4
HDAC8-201ENST00000373554 CYTH4Q9UIA0 394 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 ZNF510Q9Y2H8 683 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 HBS1LQ9Y450 684 aaKnown RBP12.57□□□□□ -0.4
HDAC8-201ENST00000373554 F5P12259 2224 aa12.57□□□□□ -0.4
HDAC8-201ENST00000373554 CAPN9O14815 690 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 PAPSS1O43252 624 aaPredicted RBP12.56□□□□□ -0.4
HDAC8-201ENST00000373554 LAMTOR5O43504 91 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 LSM8O95777 96 aaKnown RBP12.56□□□□□ -0.4
HDAC8-201ENST00000373554 NCAM1P13591 858 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 DRD1P21728 446 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 CORO1AP31146 461 aaKnown RBP12.56□□□□□ -0.4
HDAC8-201ENST00000373554 GAD2Q05329 585 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 FZD5Q13467 585 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 CCINQ13939 588 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 ANGPT1Q15389 498 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 NFKBIBQ15653 356 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 TMEM196Q5HYL7 178 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 LY6G5CQ5SRR4 150 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 MSANTD2Q6P1R3 559 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 RHBDF2Q6PJF5 856 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 NOP9Q86U38 636 aaKnown RBP12.56□□□□□ -0.4
HDAC8-201ENST00000373554 ZNF677Q86XU0 584 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 FMNL3Q8IVF7 1028 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 C1orf210Q8IVY1 113 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 SYNPOQ8N3V7 929 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 MSANTD4Q8NCY6 345 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 CPXM1Q96SM3 734 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 SPHK2Q9NRA0 654 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 RBM12Q9NTZ6 932 aaKnown RBP12.56□□□□□ -0.4
HDAC8-201ENST00000373554 SFMBT1Q9UHJ3 866 aa12.56□□□□□ -0.4
HDAC8-201ENST00000373554 A0A1B0GTH6 734 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 A0A1W2PQC6 194 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.55□□□□□ -0.4
HDAC8-201ENST00000373554 H0Y858 1186 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 TEX33O43247 280 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms