RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 FOPNLQ96NB1 174 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 PARK7Q99497 189 aaKnown RBP14.62□□□□□ -0.07
LMX1B-202ENST00000373474 SPRTNQ9H040 489 aaPredicted RBP14.62□□□□□ -0.07
LMX1B-202ENST00000373474 FRMPD4Q14CM0 1322 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 SOX11P35716 441 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 MYL6P60660 151 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 TDRD5Q8NAT2 981 aaKnown RBP14.62□□□□□ -0.07
LMX1B-202ENST00000373474 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.62□□□□□ -0.07
LMX1B-202ENST00000373474 VPS37AQ8NEZ2 397 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 PGM2Q96G03 612 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 SEPT5Q99719 369 aaPredicted RBP14.62□□□□□ -0.07
LMX1B-202ENST00000373474 MCM8Q9UJA3 840 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 AP4E1Q9UPM8 1137 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 PNMA8CA0A1B0GUJ8 204 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 PRR23AA6NEV1 266 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 MED26O95402 600 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 MPOP05164 745 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 RARAP10276 462 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 GYS1P13807 737 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 SHMT1P34896 483 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 BCAT1P54687 386 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 POU4F1Q01851 419 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 EN1Q05925 392 aaPredicted RBP14.62□□□□□ -0.07
LMX1B-202ENST00000373474 LRRC74AQ0VAA2 488 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 AMHR2Q16671 573 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 KLHL12Q53G59 568 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 ZRANB3Q5FWF4 1079 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 TIGD7Q6NT04 549 aaPredicted RBP14.62□□□□□ -0.07
LMX1B-202ENST00000373474 TXNRD3Q86VQ6 643 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 STKLD1Q8NE28 680 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 SLC35C1Q96A29 364 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 HES6Q96HZ4 224 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 PRMT6Q96LA8 375 aaPredicted RBP14.62□□□□□ -0.07
LMX1B-202ENST00000373474 KLHL3Q9UH77 587 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 SLITRK3O94933 977 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 PTPN7P35236 360 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 ZCCHC7Q8N3Z6 543 aaKnown RBP14.62□□□□□ -0.07
LMX1B-202ENST00000373474 ATP6V0D2Q8N8Y2 350 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 GPRC5AQ8NFJ5 357 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 SGF29Q96ES7 293 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 VCPIP1Q96JH7 1222 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 LATS2Q9NRM7 1088 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 DDIT4Q9NX09 232 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 RABGEF1Q9UJ41 708 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 PCDHGC5Q9Y5F6 944 aa14.62□□□□□ -0.07
LMX1B-202ENST00000373474 CFAP99D6REC4 459 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 MYCP01106 439 aaPredicted RBP14.61□□□□□ -0.07
LMX1B-202ENST00000373474 AKT1P31749 480 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 GTF2H3Q13889 308 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 MTFR1Q15390 333 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 STRA8Q7Z7C7 330 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 RIN3Q8TB24 985 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 MIEF2Q96C03 454 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 MTMR9Q96QG7 549 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 BTBD10Q9BSF8 475 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 KCTD10Q9H3F6 313 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 SPATA2Q9UM82 520 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 RWDD3Q9Y3V2 267 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 SHPRHQ149N8 1683 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 SPATA31A6Q5VVP1 1343 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 CNOT3O75175 753 aaKnown RBP14.61□□□□□ -0.07
LMX1B-202ENST00000373474 ADARP55265 1226 aaKnown RBP14.61□□□□□ -0.07
LMX1B-202ENST00000373474 TRMT5Q32P41 509 aaKnown RBP14.61□□□□□ -0.07
LMX1B-202ENST00000373474 ZNF662Q6ZS27 426 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 SKAP2O75563 359 aaPredicted RBP14.61□□□□□ -0.07
LMX1B-202ENST00000373474 PGM5Q15124 567 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 DENND1BQ6P3S1 775 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 APOPT1Q96IL0 206 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 APOL4Q9BPW4 351 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 DYRK4Q9NR20 520 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 LRCH1Q9Y2L9 728 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 FAM86B1E9PN63 330 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 PMPCBO75439 489 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 FSBPO95073 299 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 FAM86B2P0C5J1 330 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 SLC2A3P11169 496 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 CHRM3P20309 590 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 YY1P25490 414 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 CPT1AP50416 773 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 C21orf59P57076 290 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 IFI35P80217 286 aaPredicted RBP14.61□□□□□ -0.07
LMX1B-202ENST00000373474 PPIDQ08752 370 aaKnown RBP14.61□□□□□ -0.07
LMX1B-202ENST00000373474 PKN2Q16513 984 aaKnown RBP14.61□□□□□ -0.07
LMX1B-202ENST00000373474 TAF2Q6P1X5 1199 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 FOXR1Q6PIV2 292 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 IZUMO2Q6UXV1 221 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 OTOP1Q7RTM1 612 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 FAM45AQ8TCE6 357 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 CINPQ9BW66 212 aaPredicted RBP14.61□□□□□ -0.07
LMX1B-202ENST00000373474 CEP44Q9C0F1 390 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 RNF112Q9ULX5 631 aa14.61□□□□□ -0.07
LMX1B-202ENST00000373474 DDTLA6NHG4 134 aaPredicted RBP14.6□□□□□ -0.07
LMX1B-202ENST00000373474 MAP3K6O95382 1288 aa14.6□□□□□ -0.07
LMX1B-202ENST00000373474 IRF1P10914 325 aa14.6□□□□□ -0.07
LMX1B-202ENST00000373474 CPA3P15088 417 aa14.6□□□□□ -0.07
LMX1B-202ENST00000373474 GCNT1Q02742 428 aa14.6□□□□□ -0.07
LMX1B-202ENST00000373474 MRPL48Q96GC5 212 aaKnown RBP14.6□□□□□ -0.07
LMX1B-202ENST00000373474 ECSITQ9BQ95 431 aa14.6□□□□□ -0.07
LMX1B-202ENST00000373474 KRCC1Q9NPI7 259 aaPredicted RBP14.6□□□□□ -0.07
LMX1B-202ENST00000373474 BTNL10A8MVZ5 291 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms