RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 LINC01565O15544 149 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 PALMO75781 387 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 PFKLP17858 780 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 KLHDC10Q6PID8 442 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 GAREM2Q75VX8 874 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 PDZD4Q76G19 769 aaPredicted RBP16.55■□□□□ 0.24
TMEM53-204ENST00000372243 DAAM2Q86T65 1068 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 RNF139Q8WU17 664 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 SMG7Q92540 1137 aaKnown RBP16.55■□□□□ 0.24
TMEM53-204ENST00000372243 GCNAQ96QF7 691 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 SMOC2Q9H3U7 446 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 ALG6Q9Y672 507 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 DENND4CQ5VZ89 1909 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 ANAPC1Q9H1A4 1944 aa16.54■□□□□ 0.24
TMEM53-204ENST00000372243 TLR5O60602 858 aa16.54■□□□□ 0.24
TMEM53-204ENST00000372243 RNF8O76064 485 aa16.54■□□□□ 0.24
TMEM53-204ENST00000372243 IGLV3-25P01717 112 aa16.54■□□□□ 0.24
TMEM53-204ENST00000372243 RHOP08100 348 aa16.54■□□□□ 0.24
TMEM53-204ENST00000372243 HECTD3Q5T447 861 aa16.54■□□□□ 0.24
TMEM53-204ENST00000372243 NYAP1Q6ZVC0 841 aa16.54■□□□□ 0.24
TMEM53-204ENST00000372243 GPR149Q86SP6 731 aa16.54■□□□□ 0.24
TMEM53-204ENST00000372243 DQX1Q8TE96 717 aaKnown RBP16.54■□□□□ 0.24
TMEM53-204ENST00000372243 PABPC5Q96DU9 382 aaKnown RBP16.54■□□□□ 0.24
TMEM53-204ENST00000372243 PIDD1Q9HB75 910 aa16.54■□□□□ 0.24
TMEM53-204ENST00000372243 HCFC1R1Q9NWW0 138 aa16.54■□□□□ 0.24
TMEM53-204ENST00000372243 ZMYM5Q9UJ78 669 aa16.54■□□□□ 0.24
TMEM53-204ENST00000372243 ESPNB1AK53 854 aa16.53■□□□□ 0.24
TMEM53-204ENST00000372243 ZNF197O14709 1029 aa16.53■□□□□ 0.24
TMEM53-204ENST00000372243 F9P00740 461 aa16.53■□□□□ 0.24
TMEM53-204ENST00000372243 OAS1P00973 400 aaKnown RBP16.53■□□□□ 0.24
TMEM53-204ENST00000372243 TUBB4AP04350 444 aa16.53■□□□□ 0.24
TMEM53-204ENST00000372243 MYL4P12829 197 aa16.53■□□□□ 0.24
TMEM53-204ENST00000372243 DDX6P26196 483 aaKnown RBP eCLIP16.53■□□□□ 0.24
TMEM53-204ENST00000372243 GBP1P32455 592 aa16.53■□□□□ 0.24
TMEM53-204ENST00000372243 PCK1P35558 622 aa16.53■□□□□ 0.24
TMEM53-204ENST00000372243 SULT1E1P49888 294 aa16.53■□□□□ 0.24
TMEM53-204ENST00000372243 ITIH3Q06033 890 aa16.53■□□□□ 0.24
TMEM53-204ENST00000372243 EIF4EBP2Q13542 120 aaPredicted RBP16.53■□□□□ 0.24
TMEM53-204ENST00000372243 C15orf59Q2T9L4 293 aaPredicted RBP16.53■□□□□ 0.24
TMEM53-204ENST00000372243 OTUD1Q5VV17 481 aaPredicted RBP16.53■□□□□ 0.24
TMEM53-204ENST00000372243 SYCE2Q6PIF2 218 aa16.53■□□□□ 0.24
TMEM53-204ENST00000372243 TMC5Q6UXY8 1006 aa16.53■□□□□ 0.24
TMEM53-204ENST00000372243 RSRC2Q7L4I2 434 aaKnown RBP16.53■□□□□ 0.24
TMEM53-204ENST00000372243 GRASPQ7Z6J2 395 aaPredicted RBP16.53■□□□□ 0.24
TMEM53-204ENST00000372243 C12orf76Q8N812 135 aaPredicted RBP16.53■□□□□ 0.24
TMEM53-204ENST00000372243 MRPS31Q92665 395 aaKnown RBP16.53■□□□□ 0.24
TMEM53-204ENST00000372243 TBCBQ99426 244 aa16.53■□□□□ 0.24
TMEM53-204ENST00000372243 CLEC1BQ9P126 229 aa16.53■□□□□ 0.24
TMEM53-204ENST00000372243 CLUHO75153 1309 aa16.53■□□□□ 0.24
TMEM53-204ENST00000372243 M0QYT0 321 aa16.52■□□□□ 0.24
TMEM53-204ENST00000372243 LRCH4O75427 683 aa16.52■□□□□ 0.24
TMEM53-204ENST00000372243 OLFM2O95897 454 aa16.52■□□□□ 0.24
TMEM53-204ENST00000372243 TRUB2O95900 331 aaKnown RBP16.52■□□□□ 0.24
TMEM53-204ENST00000372243 COMTP21964 271 aa16.52■□□□□ 0.24
TMEM53-204ENST00000372243 ATP5C1P36542 298 aaKnown RBP16.52■□□□□ 0.24
TMEM53-204ENST00000372243 ATP11AP98196 1134 aa16.52■□□□□ 0.24
TMEM53-204ENST00000372243 NNTQ13423 1086 aa16.52■□□□□ 0.24
TMEM53-204ENST00000372243 PRSS36Q5K4E3 855 aa16.52■□□□□ 0.24
TMEM53-204ENST00000372243 ZNF569Q5MCW4 686 aa16.52■□□□□ 0.24
TMEM53-204ENST00000372243 FAM172AQ8WUF8 416 aa16.52■□□□□ 0.24
TMEM53-204ENST00000372243 SERPINB11Q96P15 392 aa16.52■□□□□ 0.24
TMEM53-204ENST00000372243 CDX2Q99626 313 aaPredicted RBP16.52■□□□□ 0.24
TMEM53-204ENST00000372243 ADAM33Q9BZ11 813 aa16.52■□□□□ 0.24
TMEM53-204ENST00000372243 ATXN3LQ9H3M9 355 aa16.52■□□□□ 0.24
TMEM53-204ENST00000372243 CCSER2Q9H7U1 834 aa16.52■□□□□ 0.24
TMEM53-204ENST00000372243 NOTCH4Q99466 2003 aa16.52■□□□□ 0.24
TMEM53-204ENST00000372243 A0A1W2PRU2 124 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 TMEM110-MUSTN1A8MSY1 372 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 IRAK2O43187 625 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 ZNF500O60304 480 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-204ENST00000372243 TBX10O75333 385 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 TFE3P19532 575 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-204ENST00000372243 RDXP35241 583 aaKnown RBP16.51■□□□□ 0.23
TMEM53-204ENST00000372243 CCR2P41597 374 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 HDAC4P56524 1084 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 GNG11P61952 73 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 ETF1P62495 437 aaKnown RBP16.51■□□□□ 0.23
TMEM53-204ENST00000372243 PITX1P78337 314 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-204ENST00000372243 CDO1Q16878 200 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 C10orf120Q5SQS8 335 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 RARS2Q5T160 578 aaKnown RBP16.51■□□□□ 0.23
TMEM53-204ENST00000372243 CC2D1AQ6P1N0 951 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-204ENST00000372243 TAC4Q86UU9 113 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 NT5DC3Q86UY8 548 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 ARFGAP1Q8N6T3 406 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 SHKBP1Q8TBC3 707 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 ADAM7Q9H2U9 754 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 GOLPH3Q9H4A6 298 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 CLDND1Q9NY35 253 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 DNMT3LQ9UJW3 386 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 AMFRQ9UKV5 643 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 JRKLQ9Y4A0 524 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 C2orf16Q68DN1 1984 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 KIF2AO00139 706 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-204ENST00000372243 COCHO43405 550 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 SPOPO43791 374 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 MOSPD3O75425 235 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 LTBRP36941 435 aa16.51■□□□□ 0.23
TMEM53-204ENST00000372243 KPNA1P52294 538 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-204ENST00000372243 DEUP1Q05D60 604 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms