RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 RAB2AP61019 212 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 PKN2Q16513 984 aaKnown RBP14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 KIZQ2M2Z5 673 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 RMND5BQ96G75 393 aaPredicted RBP14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 CUEDC1Q9NWM3 386 aaPredicted RBP14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 SNX12Q9UMY4 172 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 FOXN1O15353 648 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 OAZ1P54368 228 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 FKBP1BP68106 108 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 CBX3Q13185 183 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 NCAPHQ15003 741 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 ERICH5Q6P6B1 374 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 STK32CQ86UX6 486 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 LENG1Q96BZ8 264 aaPredicted RBP14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 RSL24D1Q9UHA3 163 aaKnown RBP14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 FAM47DPA6NHR8 397 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 TRIM64CA6NLI5 447 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 TARSP26639 723 aaKnown RBP14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 TAF6P49848 677 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 CLCN3P51790 818 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 TRAF2Q12933 501 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 LY6KQ17RY6 165 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 SPDYE7PQ495Y7 208 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 CCDC33Q8N5R6 958 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 TRPM4Q8TD43 1214 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 SLC4A9Q96Q91 983 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 EGFL8Q99944 293 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 ABHD16BQ9H3Z7 469 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 TUBGCP4Q9UGJ1 667 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 CIDEBQ9UHD4 219 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 ZNF222Q9UK12 451 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 COMMD3-BMI1R4GMX3 469 aa14.47□□□□□ -0.09
RAPGEF1-202ENST00000372190 PTPRAP18433 802 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 FBXO42Q6P3S6 717 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 KRT78Q8N1N4 520 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 MSL3Q8N5Y2 521 aaKnown RBP14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 TTC7AQ9ULT0 858 aaPredicted RBP14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 C15orf41Q9Y2V0 281 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 CAMTA1Q9Y6Y1 1673 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 GLTPD2A6NH11 291 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 RPA1P27694 616 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 SLC26A2P50443 739 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 SYTL3Q4VX76 610 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 PKN3Q6P5Z2 889 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 ARHGEF19Q8IW93 802 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 COLGALT2Q8IYK4 626 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 KAZALD1Q96I82 304 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 MED15Q96RN5 788 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 ACVR2BQ13705 512 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 METTL7BQ6UX53 244 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 AP1S3Q96PC3 154 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 TMEM79Q9BSE2 394 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 RHOBTB2Q9BYZ6 727 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 SYNDIG1Q9H7V2 258 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 ALG13Q9NP73 1137 aaKnown RBP14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 XPO7Q9UIA9 1087 aaKnown RBP14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 UBQLN1Q9UMX0 589 aaKnown RBP14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 ZNF197O14709 1029 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 ZNF185O15231 689 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 APOA4P06727 396 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 KLRC1P26715 233 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 S100A2P29034 98 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 PSMD4P55036 377 aaKnown RBP14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 SRP54P61011 504 aaKnown RBP14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 TDRD10Q5VZ19 366 aaKnown RBP14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 METTL16Q86W50 562 aaKnown RBP14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 PCDHB8Q9UN66 801 aa14.46□□□□□ -0.09
RAPGEF1-202ENST00000372190 MED1Q15648 1581 aaPredicted RBP14.46□□□□□ -0.1
RAPGEF1-202ENST00000372190 A0A1B0GTH6 734 aa14.46□□□□□ -0.1
RAPGEF1-202ENST00000372190 CHP2O43745 196 aa14.46□□□□□ -0.1
RAPGEF1-202ENST00000372190 RHAGQ02094 409 aa14.46□□□□□ -0.1
RAPGEF1-202ENST00000372190 SLC20A2Q08357 652 aa14.46□□□□□ -0.1
RAPGEF1-202ENST00000372190 GPS1Q13098 491 aa14.46□□□□□ -0.1
RAPGEF1-202ENST00000372190 MFSD10Q14728 455 aa14.46□□□□□ -0.1
RAPGEF1-202ENST00000372190 LIN54Q6MZP7 749 aa14.46□□□□□ -0.1
RAPGEF1-202ENST00000372190 SH2D3CQ8N5H7 860 aa14.46□□□□□ -0.1
RAPGEF1-202ENST00000372190 KCTD17Q8N5Z5 321 aa14.46□□□□□ -0.1
RAPGEF1-202ENST00000372190 ZNF507Q8TCN5 953 aa14.46□□□□□ -0.1
RAPGEF1-202ENST00000372190 HES6Q96HZ4 224 aa14.46□□□□□ -0.1
RAPGEF1-202ENST00000372190 CHKBQ9Y259 395 aa14.46□□□□□ -0.1
RAPGEF1-202ENST00000372190 FGFR4P22455 802 aa14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 TAP1Q03518 808 aa14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 CDC73Q6P1J9 531 aa14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 PMF1Q6P1K2 205 aa14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 MTHFD1LQ6UB35 978 aa14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 RASGRP2Q7LDG7 609 aa14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 SCUBE1Q8IWY4 988 aa14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 RFFLQ8WZ73 363 aa14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 SLC7A5P2Q9GIP4 190 aa14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 ADCY6O43306 1168 aa14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 MSCO60682 206 aa14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 FTLP02792 175 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 ULK3Q6PHR2 472 aa14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 LRRC8DQ7L1W4 858 aa14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 RNF25Q96BH1 459 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 ABI2Q9NYB9 513 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 ITIH6Q6UXX5 1313 aa14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 SCGNO76038 276 aa14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 ECDO95905 644 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF1-202ENST00000372190 HSMCR30P0CW71 290 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms