RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 MCL1Q07820 350 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 CTC1Q2NKJ3 1217 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 MUM1Q2TAK8 710 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 DCAF4L1Q3SXM0 396 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 EFHC2Q5JST6 749 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 SLFN12LQ6IEE8 588 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 FAM43BQ6ZT52 329 aaPredicted RBP11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 CENPUQ71F23 418 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 CLNKQ7Z7G1 428 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 CPNE8Q86YQ8 564 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 HERC6Q8IVU3 1022 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 RCOR2Q8IZ40 523 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 PHOSPHO2Q8TCD6 241 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 PLEKHO2Q8TD55 490 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 PARD3BQ8TEW8 1205 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 TEKT4Q8WW24 435 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 ATG4AQ8WYN0 398 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 ZNF75CPQ92670 426 aaPredicted RBP11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 PGBD4Q96DM1 585 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 RBM41Q96IZ5 413 aaKnown RBP11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 SLC9A7Q96T83 725 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 PAIP2Q9BPZ3 127 aaKnown RBP11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 CBWD1Q9BRT8 395 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 BTBD10Q9BSF8 475 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 RNF19AQ9NV58 838 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 RAB20Q9NX57 234 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 ETAA1Q9NY74 926 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 ZNF212Q9UDV6 495 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 SCOCQ9UIL1 159 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 MTO1Q9Y2Z2 717 aaKnown RBP11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 SCINQ9Y6U3 715 aa11.93□□□□□ -0.5
TSPAN1-201ENST00000372003 A0A0B4J269 797 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 TLL1O43897 1013 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 SMIM24O75264 130 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 GJB5O95377 273 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 EOMESO95936 686 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 MCF2P10911 925 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 KRT15P19012 456 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 CA4P22748 312 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 SP100P23497 879 aaPredicted RBP11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 PHBP35232 272 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 SH3BGRP55822 239 aaPredicted RBP11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 PAN2Q504Q3 1202 aaKnown RBP11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 TAF1BQ53T94 588 aaPredicted RBP11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 ZBTB41Q5SVQ8 909 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 LRRC38Q5VT99 294 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 TRIM68Q6AZZ1 485 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 AGMOQ6ZNB7 445 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 OTOAQ7RTW8 1153 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 MRPL10Q7Z7H8 261 aaKnown RBP11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 ZNF598Q86UK7 904 aaKnown RBP11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 TMEM192Q8IY95 271 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 HACE1Q8IYU2 909 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 ABI1Q8IZP0 508 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 ARHGAP18Q8N392 663 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 PPFIBP2Q8ND30 876 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 SEMA4DQ92854 862 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 NSL1Q96IY1 281 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 MFSD14AQ96MC6 490 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 FBXL18Q96ME1 805 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 YME1L1Q96TA2 773 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 FRMD8P1Q9BZ68 369 aaPredicted RBP11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 ELAC1Q9H777 363 aaKnown RBP11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 SYNCQ9H7C4 482 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 SAYSD1Q9NPB0 183 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 PDP2Q9P2J9 529 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 AGO2Q9UKV8 859 aaKnown RBP11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 INPP5FQ9Y2H2 1132 aa11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 R3HDM2Q9Y2K5 976 aaKnown RBP11.92□□□□□ -0.5
TSPAN1-201ENST00000372003 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 GOLGA8IPA6NC78 632 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 MAGEA13PA6NCF6 341 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 GOLGA8JA6NMD2 632 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 LIASO43766 372 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 DGKIO75912 1065 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 HAUS5O94927 633 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 TJP3O95049 919 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 ATP5BP06576 529 aaKnown RBP11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 MYOGP15173 224 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 TNFSF9P41273 254 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 ACOT2P49753 483 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 GEMIN4P57678 1058 aaKnown RBP11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 SLC34A1Q06495 639 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 KPNB1Q14974 876 aaKnown RBP11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 TRIP13Q15645 432 aaPredicted RBP11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 SNRNP35Q16560 246 aaKnown RBP11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 KLHL38Q2WGJ6 581 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 P3H1Q32P28 736 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 TMEM154Q6P9G4 183 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 CRIPAKQ8N1N5 446 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 ZSWIM2Q8NEG5 633 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 IFT43Q96FT9 208 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 ACAP3Q96P50 834 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 NR1H4Q96RI1 486 aaPredicted RBP11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 GAD1Q99259 594 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 FAM213AQ9BRX8 229 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 DHRS4Q9BTZ2 278 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 RSAD1Q9HA92 442 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 NMRK1Q9NWW6 199 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms