RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 UBDO15205 165 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 ADSSP30520 456 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 SUZ12Q15022 739 aaKnown RBP15.69■□□□□ 0.1
COL5A1-201ENST00000371817 CAMKK1Q8N5S9 505 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 ZSCAN18Q8TBC5 510 aaPredicted RBP15.69■□□□□ 0.1
COL5A1-201ENST00000371817 BGNP21810 368 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 SMTNL2Q2TAL5 461 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 INO80DQ53TQ3 878 aaPredicted RBP15.69■□□□□ 0.1
COL5A1-201ENST00000371817 SLC9A4Q6AI14 798 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.69■□□□□ 0.1
COL5A1-201ENST00000371817 SAPCD2Q86UD0 394 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 EHD1Q9H4M9 534 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 OR6B1O95007 311 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 MRPS22P82650 360 aaKnown RBP15.69■□□□□ 0.1
COL5A1-201ENST00000371817 NAPEPLDQ6IQ20 393 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 TMC2Q8TDI7 906 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 PNPLA3Q9NST1 481 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 BHLHE22Q8NFJ8 381 aaPredicted RBP15.69■□□□□ 0.1
COL5A1-201ENST00000371817 HTRA1Q92743 480 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 FAM120BQ96EK7 910 aaKnown RBP15.69■□□□□ 0.1
COL5A1-201ENST00000371817 SEMA6AQ9H2E6 1030 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 CLK4Q9HAZ1 481 aaKnown RBP15.69■□□□□ 0.1
COL5A1-201ENST00000371817 CROTQ9UKG9 612 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 IRAK3Q9Y616 596 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 CLASP1Q7Z460 1538 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 RBP3P10745 1247 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 ADORA2BP29275 332 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 RCAN1P53805 252 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 SMCO1Q147U7 214 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 FAM118BQ9BPY3 351 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 PCDHGA10Q9Y5H3 936 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 MYH7BA7E2Y1 1941 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 FMR1Q06787 632 aaKnown RBP eCLIP15.68■□□□□ 0.1
COL5A1-201ENST00000371817 MSLNQ13421 630 aaPredicted RBP15.68■□□□□ 0.1
COL5A1-201ENST00000371817 CCNJLQ8IV13 435 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 TCP10L2B9ZVM9 353 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 GCP02774 474 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 CCDC166P0CW27 439 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 TKTP29401 623 aaKnown RBP15.68■□□□□ 0.1
COL5A1-201ENST00000371817 IREB2P48200 963 aaKnown RBP15.68■□□□□ 0.1
COL5A1-201ENST00000371817 ACTRT1Q8TDG2 376 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 MKNK1Q9BUB5 465 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 AKAP7Q9P0M2 348 aaPredicted RBP15.68■□□□□ 0.1
COL5A1-201ENST00000371817 ATPIF1Q9UII2 106 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 DARSP14868 501 aaKnown RBP15.68■□□□□ 0.1
COL5A1-201ENST00000371817 GALK1P51570 392 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 CCNG1P51959 295 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 SPIDRQ14159 915 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 FASTKQ14296 549 aaKnown RBP15.68■□□□□ 0.1
COL5A1-201ENST00000371817 EIF2S3LQ2VIR3 472 aaKnown RBP15.68■□□□□ 0.1
COL5A1-201ENST00000371817 GPR107Q5VW38 600 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 HS6ST3Q8IZP7 471 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 FAM167AQ96KS9 214 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 C2orf40Q9H1Z8 148 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 TSPOAP1O95153 1857 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 MGAT4DA6NG13 374 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 CST8O60676 142 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 IFNGR2P38484 337 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 C11orf96Q7Z7L8 435 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 OR8H1Q8NGG4 311 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 FAM217BQ9NTX9 383 aaPredicted RBP15.68■□□□□ 0.1
COL5A1-201ENST00000371817 FBXO40Q9UH90 709 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 DHFRP00374 187 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 ZNF37AP17032 561 aaPredicted RBP15.68■□□□□ 0.1
COL5A1-201ENST00000371817 TWF1Q12792 350 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 IPMKQ8NFU5 416 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 NACC2Q96BF6 587 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 PNPLA8Q9NP80 782 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 ZNF804BA4D1E1 1349 aa15.68■□□□□ 0.1
COL5A1-201ENST00000371817 KYAT1Q16773 422 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 CATSPER4Q7RTX7 472 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 OR8H3Q8N146 312 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 PAFAH2Q99487 392 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 AGO2Q9UKV8 859 aaKnown RBP15.67■□□□□ 0.1
COL5A1-201ENST00000371817 FCHO1O14526 889 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 CHRM3P20309 590 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 STIP1P31948 543 aaKnown RBP15.67■□□□□ 0.1
COL5A1-201ENST00000371817 CAPGP40121 348 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 ZC2HC1CQ53FD0 456 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-201ENST00000371817 BTBD8Q5XKL5 378 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 ITFG1Q8TB96 612 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 MYDGFQ969H8 173 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 GPRASP2Q96D09 838 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 TEKT5Q96M29 485 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 OSBPL11Q9BXB4 747 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 CDH9Q9ULB4 789 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 NDUFAF1Q9Y375 327 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 TRIM64CA6NLI5 447 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 PDGFRAP16234 1089 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 CDK20Q8IZL9 346 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 KCTD17Q8N5Z5 321 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 MEIOBQ8N635 442 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 OSBP2Q969R2 916 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 LIMD1Q9UGP4 676 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 SYNPO2Q9UMS6 1093 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 USP17L3A6NCW0 530 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 USP17L4A6NCW7 530 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 PSMD11O00231 422 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 FBXO31Q5XUX0 539 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-201ENST00000371817 USP17L1Q7RTZ2 530 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms