RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 NUDT5Q9UKK9 219 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 MUC3AQ02505 3323 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 FAM170AA1A519 330 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 ZSCAN12O43309 604 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 MFAP3LO75121 409 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 TCF3P15923 654 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 MMP8P22894 467 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 FCHO2Q0JRZ9 810 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 GRM2Q14416 872 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 EFHC1Q5JVL4 640 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 FAM183BPQ6ZVS7 135 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 DDX42Q86XP3 938 aaKnown RBP eCLIP16.67■□□□□ 0.26
PFDN4-201ENST00000371419 YAF2Q8IY57 180 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 SLC30A5Q8TAD4 765 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 FAM149B1Q96BN6 582 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 TRMT61BQ9BVS5 477 aaKnown RBP16.67■□□□□ 0.26
PFDN4-201ENST00000371419 ZNHIT6Q9NWK9 470 aaKnown RBP16.67■□□□□ 0.26
PFDN4-201ENST00000371419 ASNSD1Q9NWL6 643 aa16.67■□□□□ 0.26
PFDN4-201ENST00000371419 THG1LQ9NWX6 298 aaKnown RBP16.67■□□□□ 0.26
PFDN4-201ENST00000371419 LEFTY2O00292 366 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 MDM4O15151 490 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 GLI1P08151 1106 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 SRFP11831 508 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 ADKP55263 362 aaKnown RBP16.66■□□□□ 0.26
PFDN4-201ENST00000371419 YWHAZP63104 245 aaKnown RBP16.66■□□□□ 0.26
PFDN4-201ENST00000371419 ZXDBP98169 803 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 SLC6A3Q01959 620 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 EFEMP1Q12805 493 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 USP4Q13107 963 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 ZNF77Q15935 545 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 PPP1R2P3Q6NXS1 205 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 OLFML1Q6UWY5 402 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 MMS22LQ6ZRQ5 1243 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 BEND5Q7L4P6 421 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 VPS36Q86VN1 386 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 XYLT1Q86Y38 959 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 PHF13Q86YI8 300 aaPredicted RBP16.66■□□□□ 0.26
PFDN4-201ENST00000371419 TMEM139Q8IV31 216 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 UBALD2Q8IYN6 164 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 TTC16Q8NEE8 873 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 OLIG1Q8TAK6 271 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 PIWIL1Q96J94 861 aaKnown RBP16.66■□□□□ 0.26
PFDN4-201ENST00000371419 ZFRQ96KR1 1074 aaKnown RBP16.66■□□□□ 0.26
PFDN4-201ENST00000371419 KLF16Q9BXK1 252 aaPredicted RBP16.66■□□□□ 0.26
PFDN4-201ENST00000371419 ABHD10Q9NUJ1 306 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 MARCH2Q9P0N8 246 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 STRIP2Q9ULQ0 834 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 DUSP12Q9UNI6 340 aa16.66■□□□□ 0.26
PFDN4-201ENST00000371419 GOLGA6L9A6NEM1 432 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 CAPN9O14815 690 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 NARSO43776 548 aaKnown RBP16.65■□□□□ 0.26
PFDN4-201ENST00000371419 HSF2BPO75031 334 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 NCAM1P13591 858 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 TNNT1P13805 278 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 GDI1P31150 447 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 SCNN1AP37088 669 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 GOLGA8FQ08AF8 430 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 GOLGA8DPQ0D2H9 430 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 MTF1Q14872 753 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 TAF5Q15542 800 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 ARHGAP29Q52LW3 1261 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 C2CD6Q53TS8 623 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 ACAD10Q6JQN1 1059 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 CC2D1AQ6P1N0 951 aaPredicted RBP16.65■□□□□ 0.26
PFDN4-201ENST00000371419 SLC26A9Q7LBE3 791 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 MIB1Q86YT6 1006 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 RIN3Q8TB24 985 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 C11orf70Q9BRQ4 267 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 BRD9Q9H8M2 597 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 POPDC2Q9HBU9 364 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 GKN1Q9NS71 199 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 ADAM22Q9P0K1 906 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 CFAP97Q9P2B7 532 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 RASAL2Q9UJF2 1139 aa16.65■□□□□ 0.26
PFDN4-201ENST00000371419 HELZP42694 1942 aaKnown RBP16.64■□□□□ 0.25
PFDN4-201ENST00000371419 CUL9Q8IWT3 2517 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 TNFRSF10AO00220 468 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 DDX3XO00571 662 aaKnown RBP eCLIP16.64■□□□□ 0.25
PFDN4-201ENST00000371419 ZNF263O14978 683 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 CHADO15335 359 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 DCXO43602 365 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 CALB1P05937 261 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 FYNP06241 537 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 GZMAP12544 262 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 GPC5P78333 572 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 COG7P83436 770 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 MSANTD2Q6P1R3 559 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 WDR59Q6PJI9 974 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 NYAP1Q6ZVC0 841 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 KIAA1958Q8N8K9 716 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 C16orf45Q96MC5 204 aaPredicted RBP16.64■□□□□ 0.25
PFDN4-201ENST00000371419 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.64■□□□□ 0.25
PFDN4-201ENST00000371419 SMOC2Q9H3U7 446 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 SLC2A4RGQ9NR83 387 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 ARHGAP20Q9P2F6 1191 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 NAALADL1Q9UQQ1 740 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 PAXBP1Q9Y5B6 917 aa16.64■□□□□ 0.25
PFDN4-201ENST00000371419 E2F8A0AVK6 867 aa16.63■□□□□ 0.25
PFDN4-201ENST00000371419 GRAP2O75791 330 aa16.63■□□□□ 0.25
PFDN4-201ENST00000371419 PLEKP08567 350 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms